RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 TPRX1Q8N7U7 411 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 TNFAIP8L1Q8WVP5 186 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 C17orf50Q8WW18 174 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 TAF15Q92804 592 aaKnown RBP eCLIP12.06□□□□□ -0.48
SS18-212ENST00000579061 SSX3Q99909 188 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 TAS2R3Q9NYW6 316 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 IL36GQ9NZH8 169 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 SESN1Q9Y6P5 492 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 TRGV10A0A0A0MS01 117 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 SLC33A1O00400 549 aaPredicted RBP12.05□□□□□ -0.48
SS18-212ENST00000579061 DEGS1O15121 323 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 CLPXO76031 633 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 FSTP19883 344 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 ZNF93P35789 620 aaPredicted RBP12.05□□□□□ -0.48
SS18-212ENST00000579061 PTGFRP43088 359 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 BDH1Q02338 343 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 RIPK1Q13546 671 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 RSU1Q15404 277 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 C6orf141Q5SZD1 244 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 DDI2Q5TDH0 399 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 DHRS7BQ6IAN0 325 aaPredicted RBP12.05□□□□□ -0.48
SS18-212ENST00000579061 NANOGP1Q8N7R0 232 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 NRG4Q8WWG1 115 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 THRSPQ92748 146 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 FOXRED1Q96CU9 486 aaPredicted RBP12.05□□□□□ -0.48
SS18-212ENST00000579061 MALSU1Q96EH3 234 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 GAL3ST2Q9H3Q3 398 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 NCOR1P1Q9H4R4 102 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 C16orf95Q9H693 158 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 PAK1IP1Q9NWT1 392 aaPredicted RBP12.05□□□□□ -0.48
SS18-212ENST00000579061 CKLFQ9UBR5 152 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 ERGIC3Q9Y282 383 aa12.05□□□□□ -0.48
SS18-212ENST00000579061 TRBV5-7A0A0A0MS05 114 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 VGLL3A8MV65 326 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 H3BUX3 64 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 TSPAN9O75954 239 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 ARG1P05089 322 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 CDK1P06493 297 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 KCNJ3P48549 501 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 AQP4P55087 323 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 SCN1BQ07699 218 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 NHLRC3Q5JS37 347 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 OR52W1Q6IF63 320 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 TRAPPC6BQ86SZ2 158 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 ZFP41Q8N8Y5 198 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 OR13C5Q8NGS8 318 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 METTL9Q9H1A3 318 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 PPA2Q9H2U2 334 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 VCX3BQ9H321 246 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 ZNF696Q9H7X3 374 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 PCDHB16Q9NRJ7 776 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 SCN3BQ9NY72 215 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 FOXJ3Q9UPW0 622 aa12.04□□□□□ -0.48
SS18-212ENST00000579061 ODAMA1E959 279 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 MEX3AA1L020 520 aaKnown RBP12.03□□□□□ -0.48
SS18-212ENST00000579061 ZNF780AO75290 641 aaPredicted RBP12.03□□□□□ -0.48
SS18-212ENST00000579061 CELP19835 753 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 GLIPR1P48060 266 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 PAX5Q02548 391 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 AESQ08117 197 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 KRBOX4Q5JUW0 171 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 MINOS1Q5TGZ0 78 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 HEPN1Q6WQI6 88 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 LIAT1Q6ZQX7 453 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 Q6ZSV7 163 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 LHFPL4Q7Z7J7 247 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 CDH26Q8IXH8 852 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 LINC01006Q8NI28 216 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 WFDC12Q8WWY7 111 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 MYDGFQ969H8 173 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 COQ2Q96H96 371 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 S100A13Q99584 98 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 CDCA4Q9BXL8 241 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 FAM192AQ9GZU8 254 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 TMEM133Q9H2Q1 129 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 IFT22Q9H7X7 185 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 RAB18Q9NP72 206 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 OR6C3Q9NZP0 311 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 ING4Q9UNL4 249 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 RNF114Q9Y508 228 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 MINOS1-NBL1R4GNA1 71 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 NBEAL1Q6ZS30 2694 aa12.03□□□□□ -0.48
SS18-212ENST00000579061 IGHV2-26A0A0B4J1V2 119 aa12.02□□□□□ -0.49
SS18-212ENST00000579061 TRAV24A0A0B4J272 114 aa12.02□□□□□ -0.49
SS18-212ENST00000579061 ZNF729A6NN14 1252 aaPredicted RBP12.02□□□□□ -0.49
SS18-212ENST00000579061 HTR3BO95264 441 aa12.02□□□□□ -0.49
SS18-212ENST00000579061 CSTBP04080 98 aaKnown RBP12.02□□□□□ -0.49
SS18-212ENST00000579061 MYF6P23409 242 aa12.02□□□□□ -0.49
SS18-212ENST00000579061 OR3A4PP47883 348 aa12.02□□□□□ -0.49
SS18-212ENST00000579061 PAN3Q58A45 887 aaKnown RBP12.02□□□□□ -0.49
SS18-212ENST00000579061 LINC00596Q86U02 117 aa12.02□□□□□ -0.49
SS18-212ENST00000579061 RTN4RL2Q86UN3 420 aa12.02□□□□□ -0.49
SS18-212ENST00000579061 OR10K1Q8NGX5 313 aa12.02□□□□□ -0.49
SS18-212ENST00000579061 ORAI1Q96D31 301 aa12.02□□□□□ -0.49
SS18-212ENST00000579061 DERL3Q96Q80 235 aa12.02□□□□□ -0.49
SS18-212ENST00000579061 OR14A2Q96R54 314 aa12.02□□□□□ -0.49
SS18-212ENST00000579061 NR1H4Q96RI1 486 aaPredicted RBP12.02□□□□□ -0.49
SS18-212ENST00000579061 ZNF184Q99676 751 aaPredicted RBP12.02□□□□□ -0.49
SS18-212ENST00000579061 MND1Q9BWT6 205 aa12.02□□□□□ -0.49
SS18-212ENST00000579061 CLEC7AQ9BXN2 247 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms