RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 ZIC3O60481 467 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 NGFP01138 241 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 SCTP09683 121 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 CHATP28329 748 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 DSCR4P56555 118 aaPredicted RBP11.86□□□□□ -0.51
NDEL1-204ENST00000578172 ZNF345Q14585 488 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 FAM189A2Q15884 450 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 LCN15Q6UWW0 184 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 GLYATL2Q8WU03 294 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 OCSTAMPQ9BR26 566 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 NMES1Q9C002 83 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 PNRC2Q9NPJ4 139 aaKnown RBP11.86□□□□□ -0.51
NDEL1-204ENST00000578172 FZR1Q9UM11 496 aa11.86□□□□□ -0.51
NDEL1-204ENST00000578172 IGKV1-27A0A075B6S5 117 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 ZNF727A8MUV8 499 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 SIRPB1O00241 398 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 ADAM20O43506 726 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 IFNA10P01566 189 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 GSK3AP49840 483 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 TMEM267Q0VDI3 215 aaPredicted RBP11.85□□□□□ -0.51
NDEL1-204ENST00000578172 SPINK9Q5DT21 86 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 CXorf66Q5JRM2 361 aaPredicted RBP11.85□□□□□ -0.51
NDEL1-204ENST00000578172 ABHD17BQ5VST6 288 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 SLC35G3Q8N808 338 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 C1orf147Q96MC9 270 aaPredicted RBP11.85□□□□□ -0.51
NDEL1-204ENST00000578172 HS3ST6Q96QI5 342 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 BCO1Q9HAY6 547 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 MMP26Q9NRE1 261 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 TUBG2Q9NRH3 451 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 SMCO3A2RU48 225 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 TERTO14746 1132 aaKnown RBP11.85□□□□□ -0.51
NDEL1-204ENST00000578172 TMEM127O75204 238 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 IL2RAP01589 272 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 TK1P04183 234 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 GRPP07492 148 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 FABP4P15090 132 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 BCL3P20749 454 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 ELLP55199 621 aaPredicted RBP11.85□□□□□ -0.51
NDEL1-204ENST00000578172 GUK1Q16774 197 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 AWAT1Q58HT5 328 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 TUSC5Q8IXB3 177 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 NECAP1Q8NC96 275 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 RARRES2Q99969 163 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 LOC400499M0QZD8 3231 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 UMODP07911 640 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 CD37P11049 281 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 OR2T2Q6IF00 324 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 TMPRSS7Q7RTY8 843 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 PP6455Q8WZ26 134 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 CYTL1Q9NRR1 136 aa11.85□□□□□ -0.51
NDEL1-204ENST00000578172 USF3Q68DE3 2245 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 IGKV1-12A0A0C4DH73 117 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 F8VVB4 439 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 F8VWA3 439 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 CBR3O75828 277 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 IGKV1D-12P01611 117 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 FCGR3AP08637 254 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 NKX2-1P43699 371 aaPredicted RBP11.84□□□□□ -0.51
NDEL1-204ENST00000578172 MRPS34P82930 218 aaKnown RBP11.84□□□□□ -0.51
NDEL1-204ENST00000578172 ZNF808Q8N4W9 903 aaPredicted RBP11.84□□□□□ -0.51
NDEL1-204ENST00000578172 OR1K1Q8NGR3 316 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 CCL28Q9NRJ3 127 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 SLC7A10Q9NS82 523 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 APC2O95996 2303 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 TBPP20226 339 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 FGF8P55075 233 aaPredicted RBP11.84□□□□□ -0.51
NDEL1-204ENST00000578172 PNLIPRP3Q17RR3 467 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 ACER2Q5QJU3 275 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 SAP25Q8TEE9 199 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 GAR1Q9NY12 217 aaKnown RBP11.84□□□□□ -0.51
NDEL1-204ENST00000578172 KPTNQ9Y664 436 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 A0A1B0GTQ1 180 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 TRAPPC2LH3BP13 241 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 CYB5BO43169 146 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 NDUFS6O75380 124 aaKnown RBP11.84□□□□□ -0.51
NDEL1-204ENST00000578172 TUSC2O75896 110 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 SERPINE2P07093 398 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 MELTFP08582 738 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 MLF1P58340 268 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 VAX1Q5SQQ9 334 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 DNM1P46Q6ZS02 220 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 TMEM105Q8N8V8 129 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 POC1AQ8NBT0 407 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 OSGIN2Q9Y236 505 aa11.84□□□□□ -0.51
NDEL1-204ENST00000578172 ATP1A1-AS1Q5TC04 95 aa11.83□□□□□ -0.52
NDEL1-204ENST00000578172 OR8G2PQ6IF36 304 aa11.83□□□□□ -0.52
NDEL1-204ENST00000578172 PTX4Q96A99 478 aa11.83□□□□□ -0.52
NDEL1-204ENST00000578172 NAA60Q9H7X0 242 aa11.83□□□□□ -0.52
NDEL1-204ENST00000578172 BARX1Q9HBU1 254 aaPredicted RBP11.83□□□□□ -0.52
NDEL1-204ENST00000578172 C7orf77A4D0Y5 90 aa11.83□□□□□ -0.52
NDEL1-204ENST00000578172 LINC01387J3KSC0 135 aa11.83□□□□□ -0.52
NDEL1-204ENST00000578172 TFF1P04155 84 aa11.83□□□□□ -0.52
NDEL1-204ENST00000578172 EIF2S3P41091 472 aaKnown RBP11.83□□□□□ -0.52
NDEL1-204ENST00000578172 PLP2Q04941 152 aa11.83□□□□□ -0.52
NDEL1-204ENST00000578172 MRPL41Q8IXM3 137 aaKnown RBP11.83□□□□□ -0.52
NDEL1-204ENST00000578172 LGI3Q8N145 548 aa11.83□□□□□ -0.52
NDEL1-204ENST00000578172 GAPTQ8N292 157 aa11.83□□□□□ -0.52
NDEL1-204ENST00000578172 ADPRHL1Q8NDY3 354 aa11.83□□□□□ -0.52
NDEL1-204ENST00000578172 OR5C1Q8NGR4 320 aa11.83□□□□□ -0.52
NDEL1-204ENST00000578172 CPNE4Q96A23 557 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms