RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 hCG_1809904A0A1W2PP81 198 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 A0A1W2PPE2 198 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 A0A1W2PR64 198 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 A0A1W2PRV1 198 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 hADV38S2A0JD32 116 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 MEGF11A6BM72 1044 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 ZNF780AO75290 641 aaPredicted RBP15.79■□□□□ 0.12
SS18-208ENST00000577751 RBP4P02753 201 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 ZNF728P0DKX0 622 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 P2RX3P56373 397 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 ERVFRD-1P60508 538 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 EMX1Q04741 257 aaPredicted RBP15.79■□□□□ 0.12
SS18-208ENST00000577751 SCN1BQ07699 218 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 SLC9A3R2Q15599 337 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 TRAM1Q15629 374 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 TMEM91Q6ZNR0 172 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 CEACAM19Q7Z692 300 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 OSR2Q8N2R0 312 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 JAGN1Q8N5M9 183 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 TPRX1Q8N7U7 411 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.79■□□□□ 0.12
SS18-208ENST00000577751 NKAIN3Q8N8D7 197 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 PHYHIPQ92561 330 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 TMEM203Q969S6 136 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 MUL1Q969V5 352 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 NR1H4Q96RI1 486 aaPredicted RBP15.79■□□□□ 0.12
SS18-208ENST00000577751 S100A13Q99584 98 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 ZMAT3Q9HA38 289 aaKnown RBP15.79■□□□□ 0.12
SS18-208ENST00000577751 LINC00312Q9Y6C7 94 aa15.79■□□□□ 0.12
SS18-208ENST00000577751 TRAV24A0A0B4J272 114 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 A0A0U1RQK1 487 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 NPFFO15130 113 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 CSTBP04080 98 aaKnown RBP15.78■□□□□ 0.12
SS18-208ENST00000577751 UCHL1P09936 223 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 CD37P11049 281 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 GPR176Q14439 515 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 PIGYQ3MUY2 71 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 ZNF367Q7RTV3 350 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 LRRTM1Q86UE6 522 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 ZDHHC16Q969W1 377 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 UQCC2Q9BRT2 126 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 PPA2Q9H2U2 334 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 IFT22Q9H7X7 185 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 HEXA-AS1Q9H8Q6 139 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 TCF7L1Q9HCS4 588 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 PCDHB16Q9NRJ7 776 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 ST3GAL6Q9Y274 331 aa15.78■□□□□ 0.12
SS18-208ENST00000577751 MRPS28Q9Y2Q9 187 aaKnown RBP15.78■□□□□ 0.12
SS18-208ENST00000577751 MEX3AA1L020 520 aaKnown RBP15.77■□□□□ 0.12
SS18-208ENST00000577751 FUOMA2VDF0 154 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 MELTFP08582 738 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 SRMP19623 302 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 SERPINA2P20848 420 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 PSMA1P25786 263 aaKnown RBP15.77■□□□□ 0.12
SS18-208ENST00000577751 RBM11P57052 281 aaKnown RBP15.77■□□□□ 0.12
SS18-208ENST00000577751 RPS25P62851 125 aaKnown RBP15.77■□□□□ 0.12
SS18-208ENST00000577751 AESQ08117 197 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 HSD17B12Q53GQ0 312 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 GLIPR1L1Q6UWM5 242 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 LDLRAD3Q86YD5 345 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 PNKDQ8N490 385 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 OR4D6Q8NGJ1 314 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 CORO2AQ92828 525 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 COQ2Q96H96 371 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 ZNF714Q96N38 554 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 DUX5Q96PT3 197 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 UBE2J1Q9Y385 318 aaPredicted RBP15.77■□□□□ 0.12
SS18-208ENST00000577751 LRRC42Q9Y546 428 aa15.77■□□□□ 0.12
SS18-208ENST00000577751 A0A1W2PP11 408 aa15.76■□□□□ 0.11
SS18-208ENST00000577751 A0A1W2PRD5 423 aa15.76■□□□□ 0.11
SS18-208ENST00000577751 A0A1W2PRF3 423 aa15.76■□□□□ 0.11
SS18-208ENST00000577751 A0A1W2PRM7 423 aa15.76■□□□□ 0.11
SS18-208ENST00000577751 HOXA3O43365 443 aaPredicted RBP15.76■□□□□ 0.11
SS18-208ENST00000577751 RNASE1P07998 156 aaKnown RBP15.76■□□□□ 0.11
SS18-208ENST00000577751 GTF2F2P13984 249 aa15.76■□□□□ 0.11
SS18-208ENST00000577751 GLIPR1P48060 266 aa15.76■□□□□ 0.11
SS18-208ENST00000577751 PAX5Q02548 391 aa15.76■□□□□ 0.11
SS18-208ENST00000577751 SLC22A6Q4U2R8 563 aa15.76■□□□□ 0.11
SS18-208ENST00000577751 LINC00596Q86U02 117 aa15.76■□□□□ 0.11
SS18-208ENST00000577751 SPARTQ8N0X7 666 aa15.76■□□□□ 0.11
SS18-208ENST00000577751 MRPS24Q96EL2 167 aaKnown RBP15.76■□□□□ 0.11
SS18-208ENST00000577751 GEMIN2O14893 280 aaKnown RBP15.75■□□□□ 0.11
SS18-208ENST00000577751 IGHV1-8P0DP01 117 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 GABRA5P31644 462 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 SAA4P35542 130 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 FABP5Q01469 135 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 SSX1Q16384 188 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 MPV17LQ2QL34 196 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 MIDNQ504T8 468 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 KRBOX4Q5JUW0 171 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 C1orf100Q5SVJ3 147 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 AWAT2Q6E213 333 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 SVOPQ8N4V2 548 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 TMEM86BQ8N661 226 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 SLC25A28Q96A46 364 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 FOXRED1Q96CU9 486 aaPredicted RBP15.75■□□□□ 0.11
SS18-208ENST00000577751 AJUBAQ96IF1 538 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 NCOR1P1Q9H4R4 102 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 ZNF581Q9P0T4 197 aa15.75■□□□□ 0.11
SS18-208ENST00000577751 KIAA2026Q5HYC2 2103 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms