RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 RBM11P57052 281 aaKnown RBP12.51□□□□□ -0.41
LITAF-217ENST00000575426 GUCA2AQ02747 115 aa12.51□□□□□ -0.41
LITAF-217ENST00000575426 PIGYQ3MUY2 71 aa12.51□□□□□ -0.41
LITAF-217ENST00000575426 NHLRC3Q5JS37 347 aa12.51□□□□□ -0.41
LITAF-217ENST00000575426 RBMS3Q6XE24 437 aaKnown RBP12.51□□□□□ -0.41
LITAF-217ENST00000575426 TSPAN14Q8NG11 270 aa12.51□□□□□ -0.41
LITAF-217ENST00000575426 C22orf15Q8WYQ4 148 aa12.51□□□□□ -0.41
LITAF-217ENST00000575426 PPA2Q9H2U2 334 aa12.51□□□□□ -0.41
LITAF-217ENST00000575426 METTL8Q9H825 291 aaKnown RBP12.51□□□□□ -0.41
LITAF-217ENST00000575426 PLGRKTQ9HBL7 147 aa12.51□□□□□ -0.41
LITAF-217ENST00000575426 SIRT7Q9NRC8 400 aa12.51□□□□□ -0.41
LITAF-217ENST00000575426 ZNF69Q9UC07 566 aa12.51□□□□□ -0.41
LITAF-217ENST00000575426 A0A0A6YYJ9 748 aa12.5□□□□□ -0.41
LITAF-217ENST00000575426 PDCD5O14737 125 aa12.5□□□□□ -0.41
LITAF-217ENST00000575426 CRTAPO75718 401 aaPredicted RBP12.5□□□□□ -0.41
LITAF-217ENST00000575426 OR7C1O76099 320 aaPredicted RBP12.5□□□□□ -0.41
LITAF-217ENST00000575426 MPV17LQ2QL34 196 aa12.5□□□□□ -0.41
LITAF-217ENST00000575426 PAN3Q58A45 887 aaKnown RBP12.5□□□□□ -0.41
LITAF-217ENST00000575426 ATAD3CQ5T2N8 411 aa12.5□□□□□ -0.41
LITAF-217ENST00000575426 NCR3LG1Q68D85 454 aa12.5□□□□□ -0.41
LITAF-217ENST00000575426 TRAPPC6BQ86SZ2 158 aa12.5□□□□□ -0.41
LITAF-217ENST00000575426 JMJD8Q96S16 334 aa12.5□□□□□ -0.41
LITAF-217ENST00000575426 BARHL1Q9BZE3 327 aa12.5□□□□□ -0.41
LITAF-217ENST00000575426 CST11Q9H112 138 aa12.5□□□□□ -0.41
LITAF-217ENST00000575426 STUB1Q9UNE7 303 aa12.5□□□□□ -0.41
LITAF-217ENST00000575426 SSR3Q9UNL2 185 aa12.5□□□□□ -0.41
LITAF-217ENST00000575426 AK6Q9Y3D8 172 aaKnown RBP12.5□□□□□ -0.41
LITAF-217ENST00000575426 IGHV1-69DA0A0B4J2H0 117 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 CENPVL3A0A0U1RRI6 287 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 H3BUI4 141 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 HSPB6O14558 160 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 GEMIN2O14893 280 aaKnown RBP12.49□□□□□ -0.41
LITAF-217ENST00000575426 IGHV1-69P01742 117 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 CSN2P05814 226 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 PRTN3P24158 256 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 HTR2CP28335 458 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 KCNJ3P48549 501 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 P2RX3P56373 397 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 AESQ08117 197 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 KRBOX4Q5JUW0 171 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 C1orf100Q5SVJ3 147 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 SYT6Q5T7P8 510 aaPredicted RBP12.49□□□□□ -0.41
LITAF-217ENST00000575426 CD200R1LQ6Q8B3 271 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 METAP1DQ6UB28 335 aaPredicted RBP12.49□□□□□ -0.41
LITAF-217ENST00000575426 BRD3OSQ6XYD6 125 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 LYPD6Q86Y78 171 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 PDZD9Q8IXQ8 264 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 Q8N7P7 452 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 TPRX1Q8N7U7 411 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 OR6M1Q8NGM8 313 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 SLC6A7Q99884 636 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 SELENOIQ9C0D9 397 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 BANF2Q9H503 90 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 HEXA-AS1Q9H8Q6 139 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 ING3Q9NXR8 418 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 LINC00312Q9Y6C7 94 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 V9GY05 133 aa12.49□□□□□ -0.41
LITAF-217ENST00000575426 TRGV10A0A0A0MS01 117 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 TRAV1-2A0A0B4J238 106 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 A0A1W2PP11 408 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 ZNF728P0DKX0 622 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 MGMTP16455 207 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 CCL3L1P16619 93 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 ERVFRD-1P60508 538 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 ZNF273Q14593 569 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 ATXN7L3Q14CW9 347 aaPredicted RBP12.48□□□□□ -0.41
LITAF-217ENST00000575426 TAF9Q16594 264 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 C22orf42Q6IC83 251 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 C9orf139Q6ZV77 190 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 SUMF2Q8NBJ7 301 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 NEK7Q8TDX7 302 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 ZNF714Q96N38 554 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 IFT22Q9H7X7 185 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 UNKLQ9H9P5 680 aaKnown RBP12.48□□□□□ -0.41
LITAF-217ENST00000575426 SPACA1Q9HBV2 294 aa12.48□□□□□ -0.41
LITAF-217ENST00000575426 UBE2J1Q9Y385 318 aaPredicted RBP12.48□□□□□ -0.41
LITAF-217ENST00000575426 ANK3Q12955 4377 aaKnown RBP12.48□□□□□ -0.41
LITAF-217ENST00000575426 TRAV24A0A0B4J272 114 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 MEX3AA1L020 520 aaKnown RBP12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A10PA6NDY2 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A18PA6NE21 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A16PA6NEW6 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A20PA6NIJ5 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A8PA6NJQ4 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A7PA6NKC0 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 C17orf98A8MV24 154 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A22PA8MWA6 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A12PA8MX19 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A5PA8MXJ8 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A23PA8MXZ1 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 MCRIP1C9JLW8 97 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 SLC17A2O00624 439 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 SLC22A1O15245 554 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 MPIG6BO95866 241 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A15PP0C7V4 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A13PP0C7W8 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A14PP0C7W9 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 FAM90A24PP0C7X0 464 aa12.47□□□□□ -0.41
LITAF-217ENST00000575426 GLIPR1P48060 266 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms