RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 RAB40AQ8WXH6 277 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 FAHD2AQ96GK7 314 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 Q96M66 194 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 DCTN5Q9BTE1 182 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 DCSTAMPQ9H295 470 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 ING3Q9NXR8 418 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 RAB22AQ9UL26 194 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 HIVEP1P15822 2718 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 A0A0B4J203 849 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 PPIAL4CA0A0B4J2A2 164 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 IGHV2-70DA0A0C4DH43 119 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 TMEM272A0A1B0GTI8 110 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A10PA6NDY2 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A18PA6NE21 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A16PA6NEW6 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A20PA6NIJ5 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A8PA6NJQ4 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A7PA6NKC0 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 A8MV72 311 aaPredicted RBP12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A22PA8MWA6 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A12PA8MX19 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A5PA8MXJ8 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A23PA8MXZ1 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 C22orf46C9J442 243 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 MCRIP1C9JLW8 97 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 SLC33A1O00400 549 aaPredicted RBP12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 MGST3O14880 152 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 PSPNO60542 156 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A15PP0C7V4 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A13PP0C7W8 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A14PP0C7W9 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM90A24PP0C7X0 464 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 PPIAL4GP0DN37 164 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 GATA3P23771 443 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 CFPP27918 469 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 RBM39Q14498 530 aaKnown RBP12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 FAM189A2Q15884 450 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 NKAPLQ5M9Q1 402 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 C17orf107Q6ZR85 190 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 SUMF2Q8NBJ7 301 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 OR4M1Q8NGD0 313 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 POM121Q96HA1 1249 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 NEDD4LQ96PU5 975 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 BCL7BQ9BQE9 202 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 MRI1Q9BV20 369 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 DPCDQ9BVM2 203 aaPredicted RBP12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 GSX1Q9H4S2 264 aaPredicted RBP12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 MMP26Q9NRE1 261 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 RPUSD1Q9UJJ7 312 aaKnown RBP12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 POLR3KQ9Y2Y1 108 aaPredicted RBP12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 VPS13CQ709C8 3753 aa12.02□□□□□ -0.49
NPLOC4-218ENST00000574964 HIVEP2P31629 2446 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 TRBV23-1A0A0A0MS06 115 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 TRAV24A0A0B4J272 114 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 KIR2DS1A0A191URI9 304 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 A0A1W2PPH5 198 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 METTL21EPA6NDL7 271 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 TMEM127O75204 238 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 FCN3O75636 299 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 LIPFP07098 398 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 SNRPBP14678 240 aaKnown RBP12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 FUT3P21217 361 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 BLVRBP30043 206 aaPredicted RBP12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 OR3A1P47881 315 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 RPL31P62899 125 aaKnown RBP12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 QRFPP83859 136 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 KRTAP1-1Q07627 177 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 ATXN7L3Q14CW9 347 aaPredicted RBP12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 RAB12Q6IQ22 244 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 Q71RC1 249 aaPredicted RBP12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 BPIFB2Q8N4F0 458 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 TM2D1Q9BX74 207 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 BARHL1Q9BZE3 327 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 SHARPINQ9H0F6 387 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 C7orf69Q9H7B7 122 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 ABRACLQ9P1F3 81 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 FBLN5Q9UBX5 448 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 INSIG2Q9Y5U4 225 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 PEX16Q9Y5Y5 336 aa12.01□□□□□ -0.49
NPLOC4-218ENST00000574964 PDCD6O75340 191 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 RAB6AP20340 208 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 KCNJ3P48549 501 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 VEGFCP49767 419 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 RORCP51449 518 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 AESQ08117 197 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 KRBOX4Q5JUW0 171 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 BRICD5Q6PL45 260 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 CMTM4Q8IZR5 234 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 TPRX1Q8N7U7 411 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 NDNFQ8TB73 568 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 LGALS14Q8TCE9 139 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 SLC25A46Q96AG3 418 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 PHF21AQ96BD5 680 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 NICN1Q9BSH3 213 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 LPAR5Q9H1C0 372 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 ATG5Q9H1Y0 275 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 IFT22Q9H7X7 185 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 C19orf12Q9NSK7 152 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 ONECUT1Q9UBC0 465 aa12□□□□□ -0.49
NPLOC4-218ENST00000574964 LPAR3Q9UBY5 353 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms