RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 SSTP61278 116 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 EFNB1P98172 346 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 COL10A1Q03692 680 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 SLC34A1Q06495 639 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 ST3GAL4Q11206 333 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 IL24Q13007 206 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 RSU1Q15404 277 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 GRK1Q15835 563 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 SMN1Q16637 294 aaKnown RBP3.98□□□□□ -1.77
CNOT1-219ENST00000569882 Q3ZCU0 254 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 OR2G6Q5TZ20 316 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 ZNF691Q5VV52 312 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 RPL22L1Q6P5R6 122 aaKnown RBP3.98□□□□□ -1.77
CNOT1-219ENST00000569882 DUX4L9Q6RFH8 374 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-219ENST00000569882 ZNF788Q6ZQV5 615 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 C11orf53Q8IXP5 236 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 FAM58AQ8N1B3 248 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 PRSS35Q8N3Z0 413 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 KIR3DL3Q8N743 410 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-219ENST00000569882 ZNF565Q8N9K5 539 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 RHOXF1Q8NHV9 184 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 ANGPTL6Q8NI99 470 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 GPR148Q8TDV2 347 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 SSMEM1Q8WWF3 244 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 CAPSLQ8WWF8 208 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 MYDGFQ969H8 173 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 ADAT3Q96EY9 351 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-219ENST00000569882 PELI1Q96FA3 418 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 C8orf49Q96NF6 230 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 GAFA1Q96PS6 74 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 SPACA5Q96QH8 159 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 NR1H4Q96RI1 486 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-219ENST00000569882 PDCD1LG2Q9BQ51 273 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 DCTN5Q9BTE1 182 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 CCDC90BQ9GZT6 254 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 METTL8Q9H825 291 aaKnown RBP3.98□□□□□ -1.77
CNOT1-219ENST00000569882 HEXA-AS1Q9H8Q6 139 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 ISG20L2Q9H9L3 353 aaKnown RBP3.98□□□□□ -1.77
CNOT1-219ENST00000569882 EXOSC4Q9NPD3 245 aaKnown RBP3.98□□□□□ -1.77
CNOT1-219ENST00000569882 PCDHB16Q9NRJ7 776 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 ABCB10Q9NRK6 738 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 MBD2Q9UBB5 411 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 DUX4Q9UBX2 424 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 OPN4Q9UHM6 478 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 EXOGQ9Y2C4 368 aaKnown RBP3.98□□□□□ -1.77
CNOT1-219ENST00000569882 MYRFQ9Y2G1 1151 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 GSTK1Q9Y2Q3 226 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 HSPE1-MOB4S4R3N1 261 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 VPS13CQ709C8 3753 aa3.98□□□□□ -1.77
CNOT1-219ENST00000569882 KIAA2026Q5HYC2 2103 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 IGKV1D-17A0A075B6S4 117 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 A0A087X0M5 115 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 TRGV10A0A0A0MS01 117 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 A0A1B0GTI1 187 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 MDFIC2A0A1B0GVS7 189 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 A0A1B0GX30 115 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 hADV38S2A0JD32 116 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 PTGES3LE9PB15 166 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 M0R1W7 72 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 SIRPB1O00241 398 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 HSPB6O14558 160 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 NPFFO15130 113 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 HOXA3O43365 443 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-219ENST00000569882 ZFPL1O95159 310 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 IGLV3-1P01715 115 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 TK1P04183 234 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 HSMCR30P0CW71 290 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 BCL3P20749 454 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 DUSP1P28562 367 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 BMXP51813 675 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 UBA52P62987 128 aaKnown RBP3.97□□□□□ -1.77
CNOT1-219ENST00000569882 ELF3P78545 371 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-219ENST00000569882 FOXL1Q12952 345 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 KLRD1Q13241 179 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 RIPK1Q13546 671 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 MED22Q15528 200 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 UBE2V2Q15819 145 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 DGUOKQ16854 277 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 DEFB112Q30KQ8 113 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 CCDC58Q4VC31 144 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 FAM76BQ5HYJ3 339 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 SPIN3Q5JUX0 258 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 ATPAF1Q5TC12 328 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-219ENST00000569882 DDI2Q5TDH0 399 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 TMEM42Q69YG0 159 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 DHRS7BQ6IAN0 325 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-219ENST00000569882 ZNF782Q6ZMW2 699 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-219ENST00000569882 ZNF841Q6ZN19 808 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 C17orf107Q6ZR85 190 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 UTS2BQ765I0 119 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 CALHM1Q8IU99 346 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 BCL6BQ8N143 479 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-219ENST00000569882 FGFRL1Q8N441 504 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 PRR18Q8N4B5 295 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 JAGN1Q8N5M9 183 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 DNAAF1Q8NEP3 725 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 OR51A4Q8NGJ6 313 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 OR13D1Q8NGV5 346 aa3.97□□□□□ -1.77
CNOT1-219ENST00000569882 NDNFQ8TB73 568 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms