RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ERP29P30040 261 aaKnown RBP9.52□□□□□ -0.89
CAPN3-220ENST00000569827 GLP1RP43220 463 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 ARHGDIBP52566 201 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 ATP1B3P54709 279 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 ACTR3P61158 418 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 DGCR2P98153 550 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 ZNF146Q15072 292 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 KRBOX4Q5JUW0 171 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 OR52W1Q6IF63 320 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 FAHD1Q6P587 224 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 AQP12AQ8IXF9 295 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 Q8IYB0 196 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 ENTHD1Q8IYW4 607 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 C5orf56Q8N8D9 126 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 RNF166Q96A37 237 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-220ENST00000569827 RPEQ96AT9 228 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 FGGYQ96C11 551 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 RAX2Q96IS3 184 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 P2RX4Q99571 388 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 HMG20AQ9NP66 347 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 GNG8Q9UK08 70 aa9.52□□□□□ -0.89
CAPN3-220ENST00000569827 IGHV3-72A0A0B4J1Y9 119 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 A0A1W2PPI3 338 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 METTL15A6NJ78 407 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 SLC33A1O00400 549 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-220ENST00000569827 SH2D1BO14796 132 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 CYB5AP00167 134 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 SERPINA3P01011 423 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 IGKV1D-33P01593 117 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 IGKV1-33P01594 117 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 TMEM11P17152 192 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 CALB2P22676 271 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 CD34P28906 385 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 CEACAM3P40198 252 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 MNDAP41218 407 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 EFNB1P98172 346 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 PDZK1IP1Q13113 114 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 FLOT2Q14254 428 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 SPIN3Q5JUX0 258 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 C12orf73Q69YU5 71 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 Q6P435 159 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 OR4D6Q8NGJ1 314 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 OR51A4Q8NGJ6 313 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 KIRREL1Q96J84 757 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 GPR61Q9BZJ8 451 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 NEK6Q9HC98 313 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 KRT84Q9NSB2 600 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 STARD9Q9P2P6 4700 aa9.51□□□□□ -0.89
CAPN3-220ENST00000569827 ZAR1LA6NP61 321 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 RPLP1P05386 114 aaKnown RBP9.5□□□□□ -0.89
CAPN3-220ENST00000569827 ZNF20P17024 532 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 LMO1P25800 156 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 MYCNOSP40205 109 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 REG1BP48304 166 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 PRRX1P54821 245 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 ZNF85Q03923 595 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 BNIP1Q12981 228 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 UNQ9370/PRO34162Q6UXP9 181 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 ZNF695Q8IW36 515 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 OR13A1Q8NGR1 328 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 OR13C9Q8NGT0 318 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 RFESDQ8TAC1 157 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 UBALD1Q8TB05 177 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 CORO2AQ92828 525 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 OPALINQ96PE5 141 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 NR1H4Q96RI1 486 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-220ENST00000569827 MNTQ99583 582 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 MCRIP2Q9BUT9 160 aaKnown RBP9.5□□□□□ -0.89
CAPN3-220ENST00000569827 TAS2R3Q9NYW6 316 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 ZNF581Q9P0T4 197 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 GLS2Q9UI32 602 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 KIF25Q9UIL4 384 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 LSM4Q9Y4Z0 139 aaKnown RBP9.5□□□□□ -0.89
CAPN3-220ENST00000569827 LYSTQ99698 3801 aa9.5□□□□□ -0.89
CAPN3-220ENST00000569827 TCRBV3S1A0A5B6 114 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 FAM90A18PA6NE21 464 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 FAM90A16PA6NEW6 464 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 FAM90A20PA6NIJ5 464 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 ZNF729A6NN14 1252 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-220ENST00000569827 FAM90A9PA6NNJ1 464 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 FAM90A12PA8MX19 464 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 FAM90A5PA8MXJ8 464 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 M0QZK8 103 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 CCL24O00175 119 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 KDM4BO94953 1096 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 FAM90A15PP0C7V4 464 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 FAM90A13PP0C7W8 464 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 FAM90A14PP0C7W9 464 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 FAM90A24PP0C7X0 464 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 OCM2P0CE71 109 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 OCMP0CE72 109 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-220ENST00000569827 UBCP0CG48 685 aaKnown RBP9.49□□□□□ -0.89
CAPN3-220ENST00000569827 FAM106CPP0CH98 169 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 POLR2IP36954 125 aaKnown RBP9.49□□□□□ -0.89
CAPN3-220ENST00000569827 ECI1P42126 302 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 NANOS3P60323 173 aaKnown RBP9.49□□□□□ -0.89
CAPN3-220ENST00000569827 CDC42P60953 191 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 LPCAT4Q643R3 524 aa9.49□□□□□ -0.89
CAPN3-220ENST00000569827 FAM53AQ6NSI3 398 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-220ENST00000569827 LHFPL2Q6ZUX7 228 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms