RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 GDPD3Q7L5L3 318 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 NR2C2APQ86WQ0 139 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 FAM216BQ8N7L0 139 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 LINC01356Q8N9X3 169 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 ZNRF1Q8ND25 227 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 TMEM104Q8NE00 496 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 NEK7Q8TDX7 302 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 PTX4Q96A99 478 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 GAFA1Q96PS6 74 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 BATF3Q9NR55 127 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 IL36RNQ9UBH0 155 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 FBLN5Q9UBX5 448 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 OR5V1Q9UGF6 321 aa13.34□□□□□ -0.27
USB1-215ENST00000569252 K7N7A8 449 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 SCGNO76038 276 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 TK1P04183 234 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 SNRPBP14678 240 aaKnown RBP13.33□□□□□ -0.28
USB1-215ENST00000569252 SPCS2Q15005 226 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 GRK1Q15835 563 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 C11orf91Q3C1V1 193 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 PAN3Q58A45 887 aaKnown RBP13.33□□□□□ -0.28
USB1-215ENST00000569252 OR56B1Q8NGI3 324 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 H1FXQ92522 213 aaKnown RBP13.33□□□□□ -0.28
USB1-215ENST00000569252 C1orf147Q96MC9 270 aaPredicted RBP13.33□□□□□ -0.28
USB1-215ENST00000569252 BARHL1Q9BZE3 327 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 ATG5Q9H1Y0 275 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 YAE1D1Q9NRH1 226 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 ZNF222Q9UK12 451 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 SPATA2Q9UM82 520 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 MAB21L2Q9Y586 359 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 PEX16Q9Y5Y5 336 aa13.33□□□□□ -0.28
USB1-215ENST00000569252 LOC105371242A0A075B767 164 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 A0A0B4J203 849 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 A0A1W2PPH5 198 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 F5H0A9 414 aaPredicted RBP13.32□□□□□ -0.28
USB1-215ENST00000569252 TFF1P04155 84 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 FUT3P21217 361 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 LMO1P25800 156 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 BLVRBP30043 206 aaPredicted RBP13.32□□□□□ -0.28
USB1-215ENST00000569252 KCNJ3P48549 501 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 VEGFCP49767 419 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 QRFPP83859 136 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 TMEM249Q2WGJ8 235 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 WDR25Q64LD2 544 aaPredicted RBP13.32□□□□□ -0.28
USB1-215ENST00000569252 Q6P435 159 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 Q96M66 194 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 IFT22Q9H7X7 185 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 PLEKHJ1Q9NW61 149 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 COMMD3Q9UBI1 195 aa13.32□□□□□ -0.28
USB1-215ENST00000569252 SLC33A1O00400 549 aaPredicted RBP13.31□□□□□ -0.28
USB1-215ENST00000569252 HSPB6O14558 160 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 MGST3O14880 152 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 PHF1O43189 567 aaPredicted RBP13.31□□□□□ -0.28
USB1-215ENST00000569252 PAHP00439 452 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 GLAP06280 429 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 IL2RGP31785 369 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 EDDM3BP56851 147 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 LCN2P80188 198 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 MRPS15P82914 257 aaKnown RBP13.31□□□□□ -0.28
USB1-215ENST00000569252 DYNC1I2Q13409 638 aaKnown RBP13.31□□□□□ -0.28
USB1-215ENST00000569252 UNC119Q13432 240 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 NKAPLQ5M9Q1 402 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 RAB12Q6IQ22 244 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 BTNL3Q6UXE8 466 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 Q6ZTK2 550 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 BTN2A1Q7KYR7 527 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 OR8H2Q8N162 312 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 SUMF2Q8NBJ7 301 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 LGALS14Q8TCE9 139 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 S100A16Q96FQ6 103 aaKnown RBP13.31□□□□□ -0.28
USB1-215ENST00000569252 DPCDQ9BVM2 203 aaPredicted RBP13.31□□□□□ -0.28
USB1-215ENST00000569252 TM2D1Q9BX74 207 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 CHST6Q9GZX3 395 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 LPAR5Q9H1C0 372 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 KCNK15Q9H427 330 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 LPAR2Q9HBW0 351 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 DIABLOQ9NR28 239 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 CTSZQ9UBR2 303 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 METRNQ9UJH8 293 aa13.31□□□□□ -0.28
USB1-215ENST00000569252 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.31□□□□□ -0.285e-11■■□□□ 11.9
USB1-215ENST00000569252 LDLRAD4O15165 306 aa13.3□□□□□ -0.28
USB1-215ENST00000569252 PDCD6O75340 191 aa13.3□□□□□ -0.28
USB1-215ENST00000569252 TGFAP01135 160 aa13.3□□□□□ -0.28
USB1-215ENST00000569252 LIPFP07098 398 aa13.3□□□□□ -0.28
USB1-215ENST00000569252 MSMBP08118 114 aa13.3□□□□□ -0.28
USB1-215ENST00000569252 AMY2BP19961 511 aa13.3□□□□□ -0.28
USB1-215ENST00000569252 EDDM3AQ14507 147 aa13.3□□□□□ -0.28
USB1-215ENST00000569252 ARL6IP1Q15041 203 aa13.3□□□□□ -0.28
USB1-215ENST00000569252 ZNF841Q6ZN19 808 aa13.3□□□□□ -0.28
USB1-215ENST00000569252 BPIFB2Q8N4F0 458 aa13.3□□□□□ -0.28
USB1-215ENST00000569252 RBM38Q9H0Z9 239 aaKnown RBP13.3□□□□□ -0.28
USB1-215ENST00000569252 PPA2Q9H2U2 334 aa13.3□□□□□ -0.28
USB1-215ENST00000569252 CCDC59Q9P031 241 aaKnown RBP13.3□□□□□ -0.28
USB1-215ENST00000569252 LPAR3Q9UBY5 353 aa13.3□□□□□ -0.28
USB1-215ENST00000569252 TRBV23-1A0A0A0MS06 115 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 TRAV20A0A0B4J274 112 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 A0A1W2PQ09 198 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 TMEM82A0PJX8 343 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 FAM157AC9JC47 383 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 RGS5O15539 181 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms