RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 OR8B8Q15620 311 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 SGCAQ16586 387 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 C10orf128Q5T292 105 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 BCL2L15Q5TBC7 163 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 OR2G6Q5TZ20 316 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 PRAMEF6Q5VXH4 476 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 OR2T2Q6IF00 324 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 HCP5Q6MZN7 132 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 SFXN4Q6P4A7 337 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 TMEM65Q6PI78 240 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 TMEM91Q6ZNR0 172 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 RRM2BQ7LG56 351 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 KRT74Q7RTS7 529 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 RNF113BQ8IZP6 322 aaKnown RBP8.99□□□□□ -0.97
CDH3-208ENST00000569036 OR6V1Q8N148 313 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 C10orf53Q8N6V4 93 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 OR51D1Q8NGF3 324 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 OR5J2Q8NH18 312 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 PTP4A1Q93096 173 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 TMEM203Q969S6 136 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 ERGIC1Q969X5 290 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 ZNF436Q9C0F3 470 aaPredicted RBP8.99□□□□□ -0.97
CDH3-208ENST00000569036 CACYBPQ9HB71 228 aaKnown RBP8.99□□□□□ -0.97
CDH3-208ENST00000569036 NUDT15Q9NV35 164 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 ZNF222Q9UK12 451 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 TCF19Q9Y242 345 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 TMEM5Q9Y2B1 443 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 TRAV38-1A0A0B4J264 116 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 A0A1B0GWJ7 208 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 A0A1W2PPL8 197 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 OOEPA6NGQ2 149 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 SLC2A10O95528 541 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 IL5P05113 134 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 OMPP47874 163 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 TGM4P49221 684 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 ZNF133P52736 654 aaPredicted RBP8.98□□□□□ -0.97
CDH3-208ENST00000569036 TAS2R41P59536 307 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 BLCAPP62952 87 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 MPPED2Q15777 294 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 ALG10BQ5I7T1 473 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 MBOAT2Q6ZWT7 520 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 HSD17B13Q7Z5P4 300 aaPredicted RBP8.98□□□□□ -0.97
CDH3-208ENST00000569036 CENPVQ7Z7K6 275 aaPredicted RBP8.98□□□□□ -0.97
CDH3-208ENST00000569036 FAM90A1Q86YD7 464 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 IQCF1Q8N6M8 205 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 BHLHE23Q8NDY6 225 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 OR11H7Q8NGC8 314 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 OR4X2Q8NGF9 303 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 OR5T2Q8NGG2 359 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 OR2T4Q8NH00 348 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 SMIM4Q8WVI0 70 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 LINC00476Q8WZB0 136 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 MRPL13Q9BYD1 178 aaKnown RBP8.98□□□□□ -0.97
CDH3-208ENST00000569036 GPN1Q9HCN4 374 aaPredicted RBP8.98□□□□□ -0.97
CDH3-208ENST00000569036 ZC4H2Q9NQZ6 224 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 HAO2Q9NYQ3 351 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 RNF7Q9UBF6 113 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 KAAG1Q9UBP8 84 aa8.98□□□□□ -0.97
CDH3-208ENST00000569036 PKHD1P08F94 4074 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 A0A087WUU8 490 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 A0A1W2PRG6 482 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 A6NDX4 124 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 HMSDA8MTL9 139 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 FMO6PO60774 539 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 OR6A2O95222 327 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 FRMD6-AS1P0C7T7 363 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 PIN1Q13526 163 aaPredicted RBP8.97□□□□□ -0.97
CDH3-208ENST00000569036 RPS26P11Q5JNZ5 115 aaPredicted RBP8.97□□□□□ -0.97
CDH3-208ENST00000569036 NHLRC3Q5JS37 347 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 IDNKQ5T6J7 187 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 FAM27BQ5VT28 67 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 C10orf99Q6UWK7 81 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 SAMD12Q8N8I0 201 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 OR52L1Q8NGH7 329 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 OR4D11Q8NGI4 311 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 TRMT10AQ8TBZ6 339 aaKnown RBP8.97□□□□□ -0.97
CDH3-208ENST00000569036 SPRYD4Q8WW59 207 aaPredicted RBP8.97□□□□□ -0.97
CDH3-208ENST00000569036 TMED9Q9BVK6 235 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 DNTTIP1Q9H147 329 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 C12orf4Q9NQ89 552 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 TAS2R5Q9NYW4 299 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 PFDN2Q9UHV9 154 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 SPATA2Q9UM82 520 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 TIMM10BQ9Y5J6 103 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 SORL1Q92673 2214 aa8.97□□□□□ -0.97
CDH3-208ENST00000569036 IGKV1D-43A0A0B4J1Z2 117 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 PDCD5O14737 125 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 CST2P09228 141 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 IFI30P13284 250 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 RAB3BP20337 219 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 LAP3P28838 519 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 ATP6V1E1P36543 226 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 NUP62P37198 522 aaPredicted RBP8.96□□□□□ -0.98
CDH3-208ENST00000569036 CD200P41217 278 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 CCR9P51686 369 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 ACTA2P62736 377 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 ACTG2P63267 376 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 KLF9Q13886 244 aaPredicted RBP8.96□□□□□ -0.98
CDH3-208ENST00000569036 LGALSLQ3ZCW2 172 aaPredicted RBP8.96□□□□□ -0.98
CDH3-208ENST00000569036 UBE2NLQ5JXB2 153 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms