RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 IGKV1-27A0A075B6S5 117 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 A0A087X0M5 115 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 A0A1B0GX30 115 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 SIRPB1O00241 398 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 DLGAP1O14490 977 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 DHRS3O75911 302 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 SOX14O95416 240 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 GASTP01350 101 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 ARSBP15848 533 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 VDAC1P21796 283 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 RUNX1Q01196 453 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 ZNF91Q05481 1191 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 AESQ08117 197 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 MAPRE2Q15555 327 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 C17orf58Q2M2W7 97 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 ACSM6Q6P461 480 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 LYPD6Q86Y78 171 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 TGIF2LXQ8IUE1 241 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 SGPP2Q8IWX5 399 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 OR4D6Q8NGJ1 314 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 OR9G1Q8NH87 305 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 RP9Q8TA86 221 aaKnown RBP9.06□□□□□ -0.96
CLK3-222ENST00000568232 EAF1Q96JC9 268 aaPredicted RBP9.06□□□□□ -0.96
CLK3-222ENST00000568232 UBE2E2Q96LR5 201 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 KCTD14Q9BQ13 255 aaPredicted RBP9.06□□□□□ -0.96
CLK3-222ENST00000568232 SAR1AQ9NR31 198 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 LIN7CQ9NUP9 197 aaKnown RBP9.06□□□□□ -0.96
CLK3-222ENST00000568232 VSIG4Q9Y279 399 aa9.06□□□□□ -0.96
CLK3-222ENST00000568232 RIIAD1A6NNX1 92 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 J3QR06 171 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 IFNGP01579 166 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 SEMG1P04279 462 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 ZNF3P17036 446 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 FSTP19883 344 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 PTGFRP43088 359 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 NPBWR2P48146 333 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 ISL1P61371 349 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 MFGE8Q08431 387 aaPredicted RBP9.05□□□□□ -0.96
CLK3-222ENST00000568232 SAMD4BQ5PRF9 694 aaKnown RBP9.05□□□□□ -0.96
CLK3-222ENST00000568232 GLYATQ6IB77 296 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 RASSF6Q6ZTQ3 369 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 SLC25A26Q70HW3 274 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 ARPINQ7Z6K5 226 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 OR2T33Q8NG76 320 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 EME1Q96AY2 570 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 NABP2Q9BQ15 211 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 GHITMQ9H3K2 345 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 CMC2Q9NRP2 79 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 PLSCR3Q9NRY6 295 aa9.05□□□□□ -0.96
CLK3-222ENST00000568232 RBFOX1Q9NWB1 397 aaKnown RBP9.05□□□□□ -0.96
CLK3-222ENST00000568232 SAMD4AQ9UPU9 718 aaKnown RBP9.05□□□□□ -0.96
CLK3-222ENST00000568232 ACOD1A6NK06 481 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 PRR32B1ATL7 298 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 TTRP02766 147 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 ALOX5APP20292 161 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 GNG10P50151 68 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 MADCAM1Q13477 382 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 EBI3Q14213 229 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 TMEM65Q6PI78 240 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 MOB3BQ86TA1 216 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 Q8N6K4 173 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 IQCF1Q8N6M8 205 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 OR14K1Q8NGZ2 314 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 EDARADDQ8WWZ3 215 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 KIRREL1Q96J84 757 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 TTTY10Q9BZA0 68 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 MRGBPQ9NV56 204 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 GLS2Q9UI32 602 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.04□□□□□ -0.96
CLK3-222ENST00000568232 PSG11Q9UQ72 335 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 BAIAP2Q9UQB8 552 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 AMMECR1Q9Y4X0 333 aaPredicted RBP9.04□□□□□ -0.96
CLK3-222ENST00000568232 V9GYS6 101 aa9.04□□□□□ -0.96
CLK3-222ENST00000568232 A0A1W2PPE3 182 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 ODAMA1E959 279 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 C12orf77C9JDV5 145 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 G3V318 75 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 MPZL2O60487 215 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 ENTPD6O75354 484 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 DEDDO75618 318 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 BRI3O95415 125 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 BCL3P20749 454 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 REG1BP48304 166 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 RAB7AP51149 207 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 ZP1P60852 638 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 UBE2V2Q15819 145 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 RNLSQ5VYX0 342 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 C8orf82Q6P1X6 216 aaPredicted RBP9.03□□□□□ -0.96
CLK3-222ENST00000568232 C10orf67Q8IYJ2 551 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 OR8H3Q8N146 312 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 FAM58AQ8N1B3 248 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 COQ2Q96H96 371 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 PYURFQ96I23 114 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 OR4C12Q96R67 309 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 S1PR3Q99500 378 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 RASL11BQ9BPW5 248 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 TMED9Q9BVK6 235 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 HIPK2Q9H2X6 1198 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 OR51J1Q9H342 316 aa9.03□□□□□ -0.96
CLK3-222ENST00000568232 SEBOXQ9HB31 216 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms