RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 BRWD3Q6RI45 1802 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 A0A0A6YYD4 124 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 ALG1L2C9J202 215 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 MASP2O00187 686 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 IGFBP3P17936 291 aaPredicted RBP9.55□□□□□ -0.88
PALB2-206ENST00000568219 GLIPR1P48060 266 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 GRB2P62993 217 aaKnown RBP9.55□□□□□ -0.88
PALB2-206ENST00000568219 HTD2P86397 168 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 SLC16A14Q7RTX9 510 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 ASB10Q8WXI3 467 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 ELSPBP1Q96BH3 223 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 ZDHHC11Q9H8X9 412 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 LOC102724200A0A096LPH7 203 aaPredicted RBP9.54□□□□□ -0.88
PALB2-206ENST00000568219 TRBV6-7A0A0A0MS04 114 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 A0A1B0GTQ1 180 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 PRAMEF26H0Y7S4 382 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 TNFSF14O43557 240 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 NRASP01111 189 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 IGHV2-5P01817 119 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 SRPXP78539 464 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 DMRTA1Q5VZB9 504 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 FDX2Q6P4F2 183 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 HIST3H2BBQ8N257 126 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 KDF1Q8NAX2 398 aaPredicted RBP9.54□□□□□ -0.88
PALB2-206ENST00000568219 FGF14Q92915 247 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 MRGPRFQ96AM1 343 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 CCDC74BQ96LY2 380 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 HIST1H2BLQ99880 126 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 ARV1Q9H2C2 271 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 PSENENQ9NZ42 101 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 HDGFL3Q9Y3E1 203 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 TRAV39A0A0B4J263 110 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 TCN2P20062 427 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 CD33P20138 364 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 APOBEC1P41238 236 aaKnown RBP9.54□□□□□ -0.88
PALB2-206ENST00000568219 SRYQ05066 204 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 FAM166AQ6J272 317 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 DPPA3Q6W0C5 159 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 TBC1D26Q86UD7 250 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 RBM14Q96PK6 669 aaKnown RBP9.54□□□□□ -0.88
PALB2-206ENST00000568219 ATP5SQ99766 215 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 FAM206AQ9NX38 181 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 C5orf42Q9H799 3197 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 MYO7BQ6PIF6 2116 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 A6NNC1 897 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 MPPED1O15442 326 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 DXOO77932 396 aaKnown RBP9.54□□□□□ -0.88
PALB2-206ENST00000568219 COL9A1P20849 921 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 MSR1P21757 451 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 OR1D5P58170 312 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 LSM6P62312 80 aaKnown RBP9.54□□□□□ -0.88
PALB2-206ENST00000568219 HIST1H3AP68431 136 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 RTP5Q14D33 572 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 C16orf82Q7Z2V1 217 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 OSR2Q8N2R0 312 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 OR2T10Q8NGZ9 312 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 OR1P1Q8NH06 330 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 SP7Q8TDD2 431 aaPredicted RBP9.54□□□□□ -0.88
PALB2-206ENST00000568219 PSMF1Q92530 271 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 GALNT14Q96FL9 552 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 FGF21Q9NSA1 209 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 KIAA2026Q5HYC2 2103 aa9.54□□□□□ -0.88
PALB2-206ENST00000568219 BLACEA4D250 179 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 ANKUB1A6NFN9 424 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 WISP1O95388 367 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 SRP19P09132 144 aaKnown RBP9.53□□□□□ -0.88
PALB2-206ENST00000568219 LTC4SQ16873 150 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 VN1R17PQ8TDU5 208 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 ADAM19Q9H013 955 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 MOB1AQ9H8S9 216 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 ALKBH4Q9NXW9 302 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 PLXNA4Q9HCM2 1894 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 C10orf91Q5T1B1 145 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 SSX7Q7RTT5 188 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 MKXQ8IYA7 352 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 GAPTQ8N292 157 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 ZNF611Q8N823 705 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 RNF150Q9ULK6 438 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 CRYM-AS1A6NIL9 109 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 ISG15P05161 165 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 COL10A1Q03692 680 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 DMWDQ09019 674 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 FOXO1Q12778 655 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 ENDOGQ14249 297 aaKnown RBP9.53□□□□□ -0.88
PALB2-206ENST00000568219 ZNF524Q96C55 264 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 DOCK7Q96N67 2140 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 SLC7A10Q9NS82 523 aa9.53□□□□□ -0.88
PALB2-206ENST00000568219 DBX1A6NMT0 343 aa9.52□□□□□ -0.88
PALB2-206ENST00000568219 MS4A18H0YCH9 400 aa9.52□□□□□ -0.88
PALB2-206ENST00000568219 EGR1P18146 543 aa9.52□□□□□ -0.88
PALB2-206ENST00000568219 ZNF90Q03938 601 aa9.52□□□□□ -0.88
PALB2-206ENST00000568219 MS4A18Q3C1V0 323 aa9.52□□□□□ -0.88
PALB2-206ENST00000568219 HIKESHIQ53FT3 197 aa9.52□□□□□ -0.88
PALB2-206ENST00000568219 SPINK9Q5DT21 86 aa9.52□□□□□ -0.88
PALB2-206ENST00000568219 ZNF519Q8TB69 540 aa9.52□□□□□ -0.88
PALB2-206ENST00000568219 VPS25Q9BRG1 176 aa9.52□□□□□ -0.88
PALB2-206ENST00000568219 VAMP8Q9BV40 100 aa9.52□□□□□ -0.88
PALB2-206ENST00000568219 CCL28Q9NRJ3 127 aa9.52□□□□□ -0.88
PALB2-206ENST00000568219 ZNF319Q9P2F9 582 aa9.52□□□□□ -0.88
PALB2-206ENST00000568219 MDFIC2A0A1B0GVS7 189 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms