RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 GALP22466 123 aa14.13□□□□□ -0.15
COMMD4-220ENST00000567720 ATXN7L3Q14CW9 347 aaPredicted RBP14.13□□□□□ -0.15
COMMD4-220ENST00000567720 RUSC1-AS1Q66K80 236 aa14.13□□□□□ -0.15
COMMD4-220ENST00000567720 TMEM200BQ69YZ2 307 aa14.13□□□□□ -0.15
COMMD4-220ENST00000567720 C22orf42Q6IC83 251 aa14.13□□□□□ -0.15
COMMD4-220ENST00000567720 BRD3OSQ6XYD6 125 aa14.13□□□□□ -0.15
COMMD4-220ENST00000567720 CMTM4Q8IZR5 234 aa14.13□□□□□ -0.15
COMMD4-220ENST00000567720 OR6M1Q8NGM8 313 aa14.13□□□□□ -0.15
COMMD4-220ENST00000567720 COQ2Q96H96 371 aa14.13□□□□□ -0.15
COMMD4-220ENST00000567720 SLC6A7Q99884 636 aa14.13□□□□□ -0.15
COMMD4-220ENST00000567720 STUB1Q9UNE7 303 aa14.13□□□□□ -0.15
COMMD4-220ENST00000567720 DEGS1O15121 323 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 OR7C1O76099 320 aaPredicted RBP14.12□□□□□ -0.15
COMMD4-220ENST00000567720 GTF2F2P13984 249 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 MGMTP16455 207 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 DLX6P56179 175 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 P2RX3P56373 397 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 KLRD1Q13241 179 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 GPR176Q14439 515 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 TUSC1Q2TAM9 212 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 PAN3Q58A45 887 aaKnown RBP14.12□□□□□ -0.15
COMMD4-220ENST00000567720 METAP1DQ6UB28 335 aaPredicted RBP14.12□□□□□ -0.15
COMMD4-220ENST00000567720 LINC00596Q86U02 117 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 OR5D13Q8NGL4 314 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 PPP1R35Q8TAP8 253 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 TNFRSF14Q92956 283 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 LHX4Q969G2 390 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 FAM46BQ96A09 425 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 FOXRED1Q96CU9 486 aaPredicted RBP14.12□□□□□ -0.15
COMMD4-220ENST00000567720 OR51E2Q9H255 320 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 BANF2Q9H503 90 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 IFT22Q9H7X7 185 aa14.12□□□□□ -0.15
COMMD4-220ENST00000567720 TXNL4BQ9NX01 149 aaKnown RBP14.12□□□□□ -0.15
COMMD4-220ENST00000567720 SOX21Q9Y651 276 aaPredicted RBP14.12□□□□□ -0.15
COMMD4-220ENST00000567720 FBN1P35555 2871 aaKnown RBP14.12□□□□□ -0.15
COMMD4-220ENST00000567720 CENPVL3A0A0U1RRI6 287 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 RNASEK-C17orf49H0YIS7 233 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 SLC17A2O00624 439 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 CRTAPO75718 401 aaPredicted RBP14.11□□□□□ -0.15
COMMD4-220ENST00000567720 VSIG8P0DPA2 414 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 GADD45AP24522 165 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 HTR2CP28335 458 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 ERP29P30040 261 aaKnown RBP14.11□□□□□ -0.15
COMMD4-220ENST00000567720 FGF9P31371 208 aaPredicted RBP14.11□□□□□ -0.15
COMMD4-220ENST00000567720 OR10A3P58181 314 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 AESQ08117 197 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 UNC119Q13432 240 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 TAF9Q16594 264 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 MPV17LQ2QL34 196 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 GPR157Q5UAW9 335 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 OR10K2Q6IF99 312 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 PDZD9Q8IXQ8 264 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 BCL6BQ8N143 479 aaPredicted RBP14.11□□□□□ -0.15
COMMD4-220ENST00000567720 C11orf42Q8N5U0 333 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 SLC25A28Q96A46 364 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 CYYR1Q96J86 154 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 Q96M66 194 aa14.11□□□□□ -0.15
COMMD4-220ENST00000567720 UNKLQ9H9P5 680 aaKnown RBP14.11□□□□□ -0.15
COMMD4-220ENST00000567720 TRAV1-2A0A0B4J238 106 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 UBBP0CG47 229 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 CD36P16671 472 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 MYL9P24844 172 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 GLIPR1P48060 266 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 ERVFRD-1P60508 538 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 QRFPP83859 136 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 SRSF2Q01130 221 aaKnown RBP14.1□□□□□ -0.15
COMMD4-220ENST00000567720 MEF2CQ06413 473 aaPredicted RBP14.1□□□□□ -0.15
COMMD4-220ENST00000567720 SCGB2A2Q13296 93 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 P2RY14Q15391 338 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 C9orf139Q6ZV77 190 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 NR2C2APQ86WQ0 139 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 BPIFB2Q8N4F0 458 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 SUMF2Q8NBJ7 301 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 PLPPR1Q8TBJ4 325 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 MRPS24Q96EL2 167 aaKnown RBP14.1□□□□□ -0.15
COMMD4-220ENST00000567720 ZNF48Q96MX3 618 aaPredicted RBP14.1□□□□□ -0.15
COMMD4-220ENST00000567720 SELENOIQ9C0D9 397 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 CST11Q9H112 138 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 METTL8Q9H825 291 aaKnown RBP14.1□□□□□ -0.15
COMMD4-220ENST00000567720 PLGRKTQ9HBL7 147 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 VCX3AQ9NNX9 186 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 PCDHB16Q9NRJ7 776 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 RCC2Q9P258 522 aaKnown RBP14.1□□□□□ -0.15
COMMD4-220ENST00000567720 GHRLQ9UBU3 117 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 LINC00312Q9Y6C7 94 aa14.1□□□□□ -0.15
COMMD4-220ENST00000567720 IGHV1-69DA0A0B4J2H0 117 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 hADV38S2A0JD32 116 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 ODAMA1E959 279 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 BPNT1O95861 308 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 MPIG6BO95866 241 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 IFNA2P01563 188 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 IGHV1-69P01742 117 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 PRTN3P24158 256 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 CLDN12P56749 244 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 KRBOX4Q5JUW0 171 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 HCP5Q6MZN7 132 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 C1orf122Q6ZSJ8 110 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 ZNF714Q96N38 554 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 CHCHD6Q9BRQ6 235 aa14.09□□□□□ -0.15
COMMD4-220ENST00000567720 DPCDQ9BVM2 203 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms