RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 KPTNQ9Y664 436 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 ARHGAP32A7KAX9 2087 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 hCG_1809904A0A1W2PP81 198 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 A0A1W2PPE2 198 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 A0A1W2PR64 198 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 A0A1W2PRV1 198 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 SLC33A1O00400 549 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-208ENST00000567250 CRLF1O75462 422 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 FCN3O75636 299 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 CD37P11049 281 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 ERP29P30040 261 aaKnown RBP10.06□□□□□ -0.8
SF3B3-208ENST00000567250 OR3A1P47881 315 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 RPL31P62899 125 aaKnown RBP10.06□□□□□ -0.8
SF3B3-208ENST00000567250 PAX8Q06710 450 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 SCN1BQ07699 218 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 EDDM3AQ14507 147 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 FAM189A2Q15884 450 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 PAN3Q58A45 887 aaKnown RBP10.06□□□□□ -0.8
SF3B3-208ENST00000567250 Q6P435 159 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 C17orf107Q6ZR85 190 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 FGFRL1Q8N441 504 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 LY6G5BQ8NDX9 201 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 NANPQ8TBE9 248 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 YIPF6Q96EC8 236 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 C1orf147Q96MC9 270 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-208ENST00000567250 URM1Q9BTM9 101 aaKnown RBP10.06□□□□□ -0.8
SF3B3-208ENST00000567250 SELENOIQ9C0D9 397 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 CHST6Q9GZX3 395 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 PPA2Q9H2U2 334 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 ONECUT1Q9UBC0 465 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 STEAP1Q9UHE8 339 aa10.06□□□□□ -0.8
SF3B3-208ENST00000567250 hADV38S2A0JD32 116 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 TMEM82A0PJX8 343 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 IFITM5A6NNB3 132 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 NOTOA8MTQ0 251 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 M0R1W7 72 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 AIPO00170 330 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 GEMIN2O14893 280 aaKnown RBP10.05□□□□□ -0.8
SF3B3-208ENST00000567250 PSPNO60542 156 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 MPIG6BO95866 241 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 VSIG8P0DPA2 414 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 SRD5A1P18405 259 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 P2RX3P56373 397 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 RPS27AP62979 156 aaKnown RBP10.05□□□□□ -0.8
SF3B3-208ENST00000567250 MEF2CQ06413 473 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-208ENST00000567250 RBM39Q14498 530 aaKnown RBP10.05□□□□□ -0.8
SF3B3-208ENST00000567250 TAF9Q16594 264 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 ATAD3CQ5T2N8 411 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 GPR141Q7Z602 305 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 CROCCP3Q8IVE0 287 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 NEK7Q8TDX7 302 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 FAM46BQ96A09 425 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 Q96M66 194 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 WDFY2Q96P53 400 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 GFI1Q99684 422 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 CENPOQ9BU64 300 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 BANF2Q9H503 90 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 SCOCQ9UIL1 159 aa10.05□□□□□ -0.8
SF3B3-208ENST00000567250 SONP18583 2426 aaKnown RBP10.04□□□□□ -0.8
SF3B3-208ENST00000567250 TRGV10A0A0A0MS01 117 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 TRAV40A0A0B4J280 105 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 A0A0G2JK05 382 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 A0A1W2PP11 408 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 SHISA3A0PJX4 238 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 TMEM14DPA8MWL7 114 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 HSPB6O14558 160 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 TMEM127O75204 238 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 TOX4O94842 621 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 FAM157CP0CG43 387 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 OR10A3P58181 314 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 PAX5Q02548 391 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 ATXN7L3Q14CW9 347 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-208ENST00000567250 PDCD1Q15116 288 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 P2RY14Q15391 338 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 HES5Q5TA89 166 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 TRAPPC6BQ86SZ2 158 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 TMEM104Q8NE00 496 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 OR4S1Q8NGB4 309 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 FAM3DQ96BQ1 224 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 UPRTQ96BW1 309 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 PCGF1Q9BSM1 259 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 DPCDQ9BVM2 203 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-208ENST00000567250 FUNDC2Q9BWH2 189 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 BARHL1Q9BZE3 327 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 SIRPDQ9H106 197 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 GAL3ST2Q9H3Q3 398 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 METTL8Q9H825 291 aaKnown RBP10.04□□□□□ -0.8
SF3B3-208ENST00000567250 C19orf12Q9NSK7 152 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 RCC2Q9P258 522 aaKnown RBP10.04□□□□□ -0.8
SF3B3-208ENST00000567250 LINC00312Q9Y6C7 94 aa10.04□□□□□ -0.8
SF3B3-208ENST00000567250 NIPBLQ6KC79 2804 aaeCLIP10.04□□□□□ -0.8
SF3B3-208ENST00000567250 TRAV24A0A0B4J272 114 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 MCRIP1C9JLW8 97 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 GLAP06280 429 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 SDC2P34741 201 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 SCAND1P57086 179 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 ARF6P62330 175 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 MXD1Q05195 221 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 UNC119Q13432 240 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 KRBOX4Q5JUW0 171 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms