RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 FSHBP01225 129 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 RBP4P02753 201 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 SELLP14151 372 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 JUNBP17275 347 aaPredicted RBP10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 SERPINA2P20848 420 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 CEBPDP49716 269 aaPredicted RBP10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 EDDM3BP56851 147 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 RBM11P57052 281 aaKnown RBP10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 PAX5Q02548 391 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 NEDD8Q15843 81 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 TMEM200BQ69YZ2 307 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 OR4D6Q8NGJ1 314 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 PCGF1Q9BSM1 259 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 SIRPDQ9H106 197 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 HEXA-AS1Q9H8Q6 139 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 PLGRKTQ9HBL7 147 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 ONECUT1Q9UBC0 465 aa10.38□□□□□ -0.75
SHCBP1-204ENST00000565887 TRIM64CA6NLI5 447 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 SIRPB1O00241 398 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 SLC33A1O00400 549 aaPredicted RBP10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 SLC17A2O00624 439 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 SLC22A1O15245 554 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 PSPNO60542 156 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 TFF1P04155 84 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 CALCBP10092 127 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 MMP9P14780 707 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 CD36P16671 472 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 EPHA1P21709 976 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 PRTN3P24158 256 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 SNU13P55769 128 aaKnown RBP10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 RBM39Q14498 530 aaKnown RBP10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 PAN3Q58A45 887 aaKnown RBP10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 C9orf139Q6ZV77 190 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 IL17RELQ6ZVW7 336 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 USP43Q70EL4 1123 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 FAM185AQ8N0U4 392 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 ZNF565Q8N9K5 539 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 OR10K1Q8NGX5 313 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 ZNF418Q8TF45 676 aaPredicted RBP10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 CORO2AQ92828 525 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 JMJD8Q96S16 334 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 MS4A7Q9GZW8 240 aaPredicted RBP10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 OR6C3Q9NZP0 311 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 IL36RNQ9UBH0 155 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 UBE2J1Q9Y385 318 aaPredicted RBP10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 LINC00312Q9Y6C7 94 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 NF1P21359 2839 aa10.37□□□□□ -0.75
SHCBP1-204ENST00000565887 MXRA5Q9NR99 2828 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 C2CD3Q4AC94 2353 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 TRGV10A0A0A0MS01 117 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 MCRIP1C9JLW8 97 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 TMEM127O75204 238 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 CA11O75493 328 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 CRTAPO75718 401 aaPredicted RBP10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 OR7C1O76099 320 aaPredicted RBP10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 ZNF728P0DKX0 622 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 ARSBP15848 533 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 MGMTP16455 207 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 RAB3BP20337 219 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 OR3A1P47881 315 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 P2RX3P56373 397 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 RAB11BQ15907 218 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 C22orf42Q6IC83 251 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 RBMS3Q6XE24 437 aaKnown RBP10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 OR2W3Q7Z3T1 314 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 FGFRL1Q8N441 504 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 BPIFB2Q8N4F0 458 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 OR4S1Q8NGB4 309 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 OR4M1Q8NGD0 313 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 KCTD7Q96MP8 289 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 URM1Q9BTM9 101 aaKnown RBP10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 SUCNR1Q9BXA5 334 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 C19orf12Q9NSK7 152 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 TXNL4BQ9NX01 149 aaKnown RBP10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 TAS2R3Q9NYW6 316 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 FBLN5Q9UBX5 448 aa10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 AK6Q9Y3D8 172 aaKnown RBP10.36□□□□□ -0.75
SHCBP1-204ENST00000565887 TRAV24A0A0B4J272 114 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 GEMIN2O14893 280 aaKnown RBP10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 GZMHP20718 246 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 FUT3P21217 361 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 CFPP27918 469 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 UBE2E1P51965 193 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 ERVFRD-1P60508 538 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 EDDM3AQ14507 147 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 KRTAP21-3Q3LHN1 58 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 PIGYQ3MUY2 71 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 KRBOX4Q5JUW0 171 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 ATAD3CQ5T2N8 411 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 SLC35E4Q6ICL7 350 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 VMO1Q7Z5L0 202 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 C1orf147Q96MC9 270 aaPredicted RBP10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 ZNF714Q96N38 554 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 TBX15Q96SF7 602 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 DPCDQ9BVM2 203 aaPredicted RBP10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 SELENOIQ9C0D9 397 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 CHST6Q9GZX3 395 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 GAL3ST2Q9H3Q3 398 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 OCEL1Q9H607 264 aa10.35□□□□□ -0.75
SHCBP1-204ENST00000565887 STEAP1Q9UHE8 339 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms