RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 ZNF470Q6ECI4 717 aa2.11□□□□□ -2.07
CHD9-215ENST00000565442 GLYATQ6IB77 296 aa2.11□□□□□ -2.07
CHD9-215ENST00000565442 USP50Q70EL3 339 aaPredicted RBP2.11□□□□□ -2.07
CHD9-215ENST00000565442 C10orf107Q8IVU9 208 aa2.11□□□□□ -2.07
CHD9-215ENST00000565442 CDRT4Q8N9R6 151 aa2.11□□□□□ -2.07
CHD9-215ENST00000565442 OR2M3Q8NG83 312 aa2.11□□□□□ -2.07
CHD9-215ENST00000565442 IGF2BP2-AS1Q96M15 143 aa2.11□□□□□ -2.07
CHD9-215ENST00000565442 APOL4Q9BPW4 351 aa2.11□□□□□ -2.07
CHD9-215ENST00000565442 ABCG5Q9H222 651 aa2.11□□□□□ -2.07
CHD9-215ENST00000565442 IFT46Q9NQC8 304 aa2.11□□□□□ -2.07
CHD9-215ENST00000565442 ZNF586Q9NXT0 402 aa2.11□□□□□ -2.07
CHD9-215ENST00000565442 ZSWIM8A7E2V4 1837 aa2.11□□□□□ -2.07
CHD9-215ENST00000565442 LTBP4Q8N2S1 1624 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 NOS1P29475 1434 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 A0A0B4J2C4 111 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 MYBPHLA2RUH7 354 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 PGPA6NDG6 321 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 A8MWP4 228 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 M0QXV9 152 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 SHOX2O60902 331 aaPredicted RBP2.1□□□□□ -2.07
CHD9-215ENST00000565442 TTPAP49638 278 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 ZNF83P51522 516 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 FOXA1P55317 472 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 MEF2BQ02080 365 aaPredicted RBP2.1□□□□□ -2.07
CHD9-215ENST00000565442 TRIP13Q15645 432 aaPredicted RBP2.1□□□□□ -2.07
CHD9-215ENST00000565442 NXNL2Q5VZ03 156 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 TMEM215Q68D42 235 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 Q6ZT83 130 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 MARCH3Q86UD3 253 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 CPNE9Q8IYJ1 553 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 OR4K17Q8NGC6 315 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 BIRC8Q96P09 236 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 CATSPER2Q96P56 530 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 VWA8A3KMH1 1905 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 UNC13AQ9UPW8 1703 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 HIVEP2P31629 2446 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 ZBED9Q6R2W3 1325 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 SYNRGQ9UMZ2 1314 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 NUP205Q92621 2012 aa2.1□□□□□ -2.07
CHD9-215ENST00000565442 TRAV8-3A0A0A6YYJ7 113 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 D6RAR5 112 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 PSIP1O75475 530 aaKnown RBP2.09□□□□□ -2.07
CHD9-215ENST00000565442 CPSF4O95639 269 aaKnown RBP2.09□□□□□ -2.07
CHD9-215ENST00000565442 IGHV3-53P01767 116 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 APOA1P02647 267 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 CGB3P0DN86 165 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 CGB7P0DN87 165 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 GTF2F2P13984 249 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 MAGEA3P43357 314 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 TSPAN5P62079 268 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 EIF4E3Q8N5X7 224 aaKnown RBP2.09□□□□□ -2.07
CHD9-215ENST00000565442 CMTM2Q8TAZ6 248 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 OR5P2Q8WZ92 322 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 MAL2Q969L2 176 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 OLFM3Q96PB7 478 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 PKMYT1Q99640 499 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 RHOFQ9HBH0 211 aa2.09□□□□□ -2.07
CHD9-215ENST00000565442 GGTLC3B5MD39 225 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 AQP9O43315 295 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 PLTPP55058 493 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 HBG1P69891 147 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 HBG2P69892 147 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 BAXQ07812 192 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 STX3Q13277 289 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 FBXO48Q5FWF7 155 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 ELP2Q6IA86 826 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 HCP5Q6MZN7 132 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 AHSA2Q719I0 299 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 COMTD1Q86VU5 262 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 GATD1Q8NB37 220 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 MUC7Q8TAX7 377 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 IFT81Q8WYA0 676 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 PITX2Q99697 317 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 SUCNR1Q9BXA5 334 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 GOLPH3Q9H4A6 298 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 MRM2Q9UI43 246 aaKnown RBP2.08□□□□□ -2.08
CHD9-215ENST00000565442 POFUT2Q9Y2G5 429 aa2.08□□□□□ -2.08
CHD9-215ENST00000565442 SCRIBQ14160 1630 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 A6NED7 52 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 H3BMM0 161 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 CDIPTO14735 213 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 SYNGR2O43760 224 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 CST4P01036 141 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 HLA-AP01891 365 aaKnown RBP2.07□□□□□ -2.08
CHD9-215ENST00000565442 SLC2A1P11166 492 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 GABRA1P14867 456 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 ZNF708P17019 499 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 LGALS3P17931 250 aaKnown RBP2.07□□□□□ -2.08
CHD9-215ENST00000565442 CNTFRP26992 372 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 ELK4P28324 431 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 CRABP2P29373 138 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 TSPOP30536 169 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 GTF2H1P32780 548 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 RPA3P35244 121 aaPredicted RBP2.07□□□□□ -2.08
CHD9-215ENST00000565442 AQP5P55064 265 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 PRDX1Q06830 199 aaKnown RBP2.07□□□□□ -2.08
CHD9-215ENST00000565442 GOLGA7BQ2TAP0 167 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 CEACAM21Q3KPI0 293 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 LAIR2Q6ISS4 152 aa2.07□□□□□ -2.08
CHD9-215ENST00000565442 CYHR1Q6ZMK1 362 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms