RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 PRAMEF5Q5TYX0 476 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 BAIAP2L2Q6UXY1 529 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 Q6ZS46 218 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 SAXO1Q8IYX7 474 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 ZNF555Q8NEP9 628 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 OR5AU1Q8NGC0 362 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 RHOXF1Q8NHV9 184 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 ZNF596Q8TC21 504 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 TSEN15Q8WW01 171 aaKnown RBP5.16□□□□□ -1.58
TCF4-228ENST00000565393 SGCDQ92629 289 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 CORO2AQ92828 525 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 RNF166Q96A37 237 aaPredicted RBP5.16□□□□□ -1.58
TCF4-228ENST00000565393 CREB3L1Q96BA8 519 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 AKR1E2Q96JD6 320 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 SLC29A1Q99808 456 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 CITED2Q99967 270 aaPredicted RBP5.16□□□□□ -1.58
TCF4-228ENST00000565393 C9orf16Q9BUW7 83 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 BARHL1Q9BZE3 327 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 MMP28Q9H239 520 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 RHOFQ9HBH0 211 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 SERTAD4Q9NUC0 356 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 FAM118AQ9NWS6 357 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 ERVK13-1Q9NX77 482 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 ING4Q9UNL4 249 aa5.16□□□□□ -1.58
TCF4-228ENST00000565393 RPL36Q9Y3U8 105 aaKnown RBP5.16□□□□□ -1.58
TCF4-228ENST00000565393 MEIKINA0A087WXM9 373 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 TCRBV4S1A1TA0A5B7 111 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 TMEM212A6NML5 194 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 FAM90A22PA8MWA6 464 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 H0YJX3 145 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 BUB1B-PAK6H3BSN5 160 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 SLC33A1O00400 549 aaPredicted RBP5.15□□□□□ -1.59
TCF4-228ENST00000565393 ZFPL1O95159 310 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 HTR3BO95264 441 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 IGHV3-7P01780 117 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 LPLP06858 475 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 CCDC159P0C7I6 412 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 FAM106CPP0CH98 169 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 RAB3AP20336 220 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 PTGFRP43088 359 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 OR3A4PP47883 348 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 MTNR1BP49286 362 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 GTF2A1P52655 376 aaPredicted RBP5.15□□□□□ -1.59
TCF4-228ENST00000565393 BDH1Q02338 343 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 RAB40BQ12829 278 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 MRPL28Q13084 256 aaKnown RBP5.15□□□□□ -1.59
TCF4-228ENST00000565393 ATXN7L3Q14CW9 347 aaPredicted RBP5.15□□□□□ -1.59
TCF4-228ENST00000565393 RSU1Q15404 277 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 LTC4SQ16873 150 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 ABCA11PQ4W5N1 156 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 OXLD1Q5BKU9 147 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 ZNF691Q5VV52 312 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 LPCAT4Q643R3 524 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 Q6P435 159 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 HEPN1Q6WQI6 88 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 TCF23Q7RTU1 214 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 NDUFA11Q86Y39 141 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 Q8N2B8 174 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 SYS1Q8N2H4 156 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 CHST4Q8NCG5 386 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 OR4F17Q8NGA8 305 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 OR52I1Q8NGK6 324 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 RFESDQ8TAC1 157 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 TNFAIP8L1Q8WVP5 186 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 CPNE2Q96FN4 548 aaPredicted RBP5.15□□□□□ -1.59
TCF4-228ENST00000565393 OR4F4Q96R69 305 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 S100A13Q99584 98 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 PDCD1LG2Q9BQ51 273 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 S100A14Q9HCY8 104 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 INPP5EQ9NRR6 644 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 CHCHD3Q9NX63 227 aaKnown RBP5.15□□□□□ -1.59
TCF4-228ENST00000565393 OR6C3Q9NZP0 311 aa5.15□□□□□ -1.59
TCF4-228ENST00000565393 KBTBD11-OT1A0A1B0GTJ5 212 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 ODAMA1E959 279 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 SH2D7A6NKC9 451 aaPredicted RBP5.14□□□□□ -1.59
TCF4-228ENST00000565393 ZNF729A6NN14 1252 aaPredicted RBP5.14□□□□□ -1.59
TCF4-228ENST00000565393 EBAG9O00559 213 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 XPNPEP2O43895 674 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 ALX3O95076 343 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 CSTBP04080 98 aaKnown RBP5.14□□□□□ -1.59
TCF4-228ENST00000565393 CD2P06729 351 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 GABRB1P18505 474 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 CD33P20138 364 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 GDNFP39905 211 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 HES1Q14469 280 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 HNF4GQ14541 408 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 CDK5R1Q15078 307 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 ZSCAN26Q16670 478 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 BEAN1Q3B7T3 259 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 PAN3Q58A45 887 aaKnown RBP5.14□□□□□ -1.59
TCF4-228ENST00000565393 TPTE2P1Q5T6R2 138 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 RPL22L1Q6P5R6 122 aaKnown RBP5.14□□□□□ -1.59
TCF4-228ENST00000565393 TMPRSS11AQ6ZMR5 421 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 PARP16Q8N5Y8 322 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 OR4P4Q8NGL7 312 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 OR10K1Q8NGX5 313 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 OR9G1Q8NH87 305 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 CNIH3Q8TBE1 160 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 GPR148Q8TDV2 347 aa5.14□□□□□ -1.59
TCF4-228ENST00000565393 LEAP2Q969E1 77 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms