RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ZNF329Q86UD4 541 aa11.17□□□□□ -0.62
CDR2-204ENST00000564542 OR10H4Q8NGA5 316 aa11.17□□□□□ -0.62
CDR2-204ENST00000564542 UTP4Q969X6 686 aaKnown RBP11.17□□□□□ -0.62
CDR2-204ENST00000564542 SPSB1Q96BD6 273 aa11.17□□□□□ -0.62
CDR2-204ENST00000564542 OPALINQ96PE5 141 aa11.17□□□□□ -0.62
CDR2-204ENST00000564542 COMMD4Q9H0A8 199 aa11.17□□□□□ -0.62
CDR2-204ENST00000564542 PCDHB16Q9NRJ7 776 aa11.17□□□□□ -0.62
CDR2-204ENST00000564542 IGKV1-12A0A0C4DH73 117 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 FAM90A18PA6NE21 464 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 FAM90A16PA6NEW6 464 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 FAM90A20PA6NIJ5 464 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 ZNF729A6NN14 1252 aaPredicted RBP11.16□□□□□ -0.62
CDR2-204ENST00000564542 FAM90A9PA6NNJ1 464 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 FAM90A12PA8MX19 464 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 FAM90A5PA8MXJ8 464 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 KDM4BO94953 1096 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 APOL3O95236 402 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 IGKV1D-12P01611 117 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 CCDC159P0C7I6 412 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 FAM90A15PP0C7V4 464 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 FAM90A13PP0C7W8 464 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 FAM90A14PP0C7W9 464 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 FAM90A24PP0C7X0 464 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 ATF1P18846 271 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 ISL1P61371 349 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 C8orf86Q6ZUL3 223 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 THNSL2Q86YJ6 484 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 RDH10Q8IZV5 341 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 CHST4Q8NCG5 386 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 CCDC197Q8NCU1 140 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 OR9G1Q8NH87 305 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 CHPT1Q8WUD6 406 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 RPEQ96AT9 228 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 COQ2Q96H96 371 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 ZMAT5Q9UDW3 170 aaKnown RBP11.16□□□□□ -0.62
CDR2-204ENST00000564542 GNG8Q9UK08 70 aa11.16□□□□□ -0.62
CDR2-204ENST00000564542 AMMECR1Q9Y4X0 333 aaPredicted RBP11.16□□□□□ -0.62
CDR2-204ENST00000564542 SNRNP70P08621 437 aaKnown RBP11.15□□□□□ -0.62
CDR2-204ENST00000564542 ZNF44P15621 663 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 ZNF20P17024 532 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 MYCNOSP40205 109 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 C17orf58Q2M2W7 97 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 DNAL1Q4LDG9 190 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 KRBOX4Q5JUW0 171 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 UTF1Q5T230 341 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 TMEM244Q5VVB8 128 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 KDM4DQ6B0I6 523 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 RNF144BQ7Z419 303 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 C5orf56Q8N8D9 126 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 OR56B4Q8NH76 319 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 TOMM40LQ969M1 308 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 RNF166Q96A37 237 aaPredicted RBP11.15□□□□□ -0.62
CDR2-204ENST00000564542 RFT1Q96AA3 541 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 KIRREL1Q96J84 757 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 MBOAT4Q96T53 435 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 P2RX4Q99571 388 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 RHOFQ9HBH0 211 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 ZFP57Q9NU63 452 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 OR6C3Q9NZP0 311 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 ENOPH1Q9UHY7 261 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 POMPQ9Y244 141 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 KIAA2026Q5HYC2 2103 aa11.15□□□□□ -0.62
CDR2-204ENST00000564542 KBTBD11-OT1A0A1B0GTJ5 212 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 NUDT19A8MXV4 375 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 G3V2T6 193 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 H0YHG0 523 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 SLC33A1O00400 549 aaPredicted RBP11.14□□□□□ -0.63
CDR2-204ENST00000564542 FGF16O43320 207 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 ISG15P05161 165 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 OCM2P0CE71 109 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 OCMP0CE72 109 aaPredicted RBP11.14□□□□□ -0.63
CDR2-204ENST00000564542 NHLRC4P0CG21 123 aaPredicted RBP11.14□□□□□ -0.63
CDR2-204ENST00000564542 NFYBP25208 207 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 ATP6V1E1P36543 226 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 DGCR2P98153 550 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 TMED1Q13445 227 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 ATXN7L3Q14CW9 347 aaPredicted RBP11.14□□□□□ -0.63
CDR2-204ENST00000564542 TP53I3Q53FA7 332 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 Q6P435 159 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 UNQ9370/PRO34162Q6UXP9 181 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 C18orf65Q6ZTR6 163 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 SAXO1Q8IYX7 474 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 COMMD1Q8N668 190 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 KLHL30-AS1Q8NEE0 82 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 OR5D18Q8NGL1 313 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 OR2G2Q8NGZ5 317 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 FGGYQ96C11 551 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 NOL4LQ96MY1 436 aaPredicted RBP11.14□□□□□ -0.63
CDR2-204ENST00000564542 GABARAPL1Q9H0R8 117 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 PPIL3Q9H2H8 161 aaKnown RBP11.14□□□□□ -0.63
CDR2-204ENST00000564542 ING3Q9NXR8 418 aa11.14□□□□□ -0.63
CDR2-204ENST00000564542 A0A1W2PPI3 338 aa11.13□□□□□ -0.63
CDR2-204ENST00000564542 SERPINE3A8MV23 424 aa11.13□□□□□ -0.63
CDR2-204ENST00000564542 GYG2O15488 501 aa11.13□□□□□ -0.63
CDR2-204ENST00000564542 MT-ND2P03891 347 aa11.13□□□□□ -0.63
CDR2-204ENST00000564542 TMEM11P17152 192 aa11.13□□□□□ -0.63
CDR2-204ENST00000564542 SLC35B1P78383 322 aa11.13□□□□□ -0.63
CDR2-204ENST00000564542 ZNF85Q03923 595 aa11.13□□□□□ -0.63
CDR2-204ENST00000564542 SCN1BQ07699 218 aa11.13□□□□□ -0.63
CDR2-204ENST00000564542 HES1Q14469 280 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms