RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 DUX4L9Q6RFH8 374 aaPredicted RBP12.9□□□□□ -0.34
USB1-208ENST00000563207 BTNL3Q6UXE8 466 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 BATF2Q8N1L9 274 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 OSR2Q8N2R0 312 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 CD177Q8N6Q3 437 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 FAM216BQ8N7L0 139 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 CHST4Q8NCG5 386 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 OR4D6Q8NGJ1 314 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 OR5D13Q8NGL4 314 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 PPP1R35Q8TAP8 253 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 SNX22Q96L94 193 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 CHCHD6Q9BRQ6 235 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 ZNF747Q9BV97 191 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 CST11Q9H112 138 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 DUX4Q9UBX2 424 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 SLC25A10Q9UBX3 287 aaPredicted RBP12.9□□□□□ -0.34
USB1-208ENST00000563207 AK6Q9Y3D8 172 aaKnown RBP12.9□□□□□ -0.34
USB1-208ENST00000563207 K7N7A8 449 aa12.89□□□□□ -0.35
USB1-208ENST00000563207 HOXA3O43365 443 aaPredicted RBP12.89□□□□□ -0.35
USB1-208ENST00000563207 AIREO43918 545 aa12.89□□□□□ -0.35
USB1-208ENST00000563207 RAB3BP20337 219 aa12.89□□□□□ -0.35
USB1-208ENST00000563207 SRSF4Q08170 494 aaKnown RBP12.89□□□□□ -0.35
USB1-208ENST00000563207 SLC22A6Q4U2R8 563 aa12.89□□□□□ -0.35
USB1-208ENST00000563207 C9orf139Q6ZV77 190 aa12.89□□□□□ -0.35
USB1-208ENST00000563207 ZNRF1Q8ND25 227 aa12.89□□□□□ -0.35
USB1-208ENST00000563207 PCGF1Q9BSM1 259 aa12.89□□□□□ -0.35
USB1-208ENST00000563207 PLGRKTQ9HBL7 147 aa12.89□□□□□ -0.35
USB1-208ENST00000563207 TRRAPQ9Y4A5 3859 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 TRBV23-1A0A0A0MS06 115 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 LOC100506127A0A0U1RQW1 187 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 ENSAO43768 121 aaKnown RBP12.88□□□□□ -0.35
USB1-208ENST00000563207 TMEM127O75204 238 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 ZNF737O75373 536 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 BPNT1O95861 308 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 TFF1P04155 84 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 TK1P04183 234 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 TFAP2AP05549 437 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 PPIAL4GP0DN37 164 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 SERPINA2P20848 420 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 MDKP21741 143 aaPredicted RBP12.88□□□□□ -0.35
USB1-208ENST00000563207 ALDH3B2P48448 385 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 RBM11P57052 281 aaKnown RBP12.88□□□□□ -0.35
USB1-208ENST00000563207 COL10A1Q03692 680 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 PRB3Q04118 309 aaPredicted RBP12.88□□□□□ -0.35
USB1-208ENST00000563207 FOXL1Q12952 345 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 IKZF1Q13422 519 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 RAB11BQ15907 218 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 MPV17LQ2QL34 196 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 BTN2A1Q7KYR7 527 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 TMEM185AQ8NFB2 350 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 SGMS2Q8NHU3 365 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 KCNG3Q8TAE7 436 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 C8orf46Q8TAG6 207 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 ST8SIA4Q92187 359 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 TBX15Q96SF7 602 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 GFI1Q99684 422 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 IFT22Q9H7X7 185 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 UNKLQ9H9P5 680 aaKnown RBP12.88□□□□□ -0.35
USB1-208ENST00000563207 SCOCQ9UIL1 159 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 ST3GAL6Q9Y274 331 aa12.88□□□□□ -0.35
USB1-208ENST00000563207 FAM90A10PA6NDY2 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A18PA6NE21 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A16PA6NEW6 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A20PA6NIJ5 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A8PA6NJQ4 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A7PA6NKC0 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A22PA8MWA6 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A12PA8MX19 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A5PA8MXJ8 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A23PA8MXZ1 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 DEGS1O15121 323 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 KCNAB3O43448 404 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 OR2H2O95918 312 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A15PP0C7V4 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A13PP0C7W8 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A14PP0C7W9 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FAM90A24PP0C7X0 464 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 MMP9P14780 707 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 ARSBP15848 533 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 NDUFB7P17568 137 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 CEBPDP49716 269 aaPredicted RBP12.87□□□□□ -0.35
USB1-208ENST00000563207 Q6P435 159 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 OR2W3Q7Z3T1 314 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 GPR141Q7Z602 305 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 OR8H2Q8N162 312 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 ASCC1Q8N9N2 400 aaKnown RBP12.87□□□□□ -0.35
USB1-208ENST00000563207 OR10K1Q8NGX5 313 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 SLC25A28Q96A46 364 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 NKX3-1Q99801 234 aaPredicted RBP12.87□□□□□ -0.35
USB1-208ENST00000563207 DCTN5Q9BTE1 182 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 CENPOQ9BU64 300 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 FUNDC2Q9BWH2 189 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 SPACA1Q9HBV2 294 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 IL36RNQ9UBH0 155 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 STEAP1Q9UHE8 339 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 RPUSD1Q9UJJ7 312 aaKnown RBP12.87□□□□□ -0.35
USB1-208ENST00000563207 DSCAML1Q8TD84 2053 aa12.87□□□□□ -0.35
USB1-208ENST00000563207 CENPVL3A0A0U1RRI6 287 aa12.86□□□□□ -0.35
USB1-208ENST00000563207 SHISA3A0PJX4 238 aa12.86□□□□□ -0.35
USB1-208ENST00000563207 FUOMA2VDF0 154 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms