RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 ADAT3Q96EY9 351 aaPredicted RBP13.16□□□□□ -0.3
CMTM3-205ENST00000562707 ZFP57Q9NU63 452 aa13.16□□□□□ -0.3
CMTM3-205ENST00000562707 IGKV1-9A0A0C4DH69 117 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 ODAMA1E959 279 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 APOL3O95236 402 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 CCDC159P0C7I6 412 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 ZNF20P17024 532 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 NFYBP25208 207 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 LMO1P25800 156 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 EPHA2P29317 976 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 SLC6A1P30531 599 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 MYCNOSP40205 109 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 RPL23AP62750 156 aaKnown RBP13.15□□□□□ -0.3
CMTM3-205ENST00000562707 ETV3LQ6ZN32 361 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 RPEQ96AT9 228 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 FGGYQ96C11 551 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 ING3Q9NXR8 418 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 ENOPH1Q9UHY7 261 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 GNG8Q9UK08 70 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 AMMECR1Q9Y4X0 333 aaPredicted RBP13.15□□□□□ -0.3
CMTM3-205ENST00000562707 DNAH9Q9NYC9 4486 aa13.15□□□□□ -0.3
CMTM3-205ENST00000562707 A0A087X0M5 115 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 A0A1B0GX30 115 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 ZNF729A6NN14 1252 aaPredicted RBP13.14□□□□□ -0.31
CMTM3-205ENST00000562707 G3V2T6 193 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 GYG2O15488 501 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 NHLRC4P0CG21 123 aaPredicted RBP13.14□□□□□ -0.31
CMTM3-205ENST00000562707 KIR3DL2P43630 455 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 DGCR2P98153 550 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 OR2W3Q7Z3T1 314 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 RNF144BQ7Z419 303 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 CHST4Q8NCG5 386 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 OR9G1Q8NH87 305 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 TOMM40LQ969M1 308 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 UTP4Q969X6 686 aaKnown RBP13.14□□□□□ -0.31
CMTM3-205ENST00000562707 RFT1Q96AA3 541 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 OPALINQ96PE5 141 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 COMMD4Q9H0A8 199 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 RHOFQ9HBH0 211 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 OR6C3Q9NZP0 311 aa13.14□□□□□ -0.31
CMTM3-205ENST00000562707 IGKV1-12A0A0C4DH73 117 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 FAM90A18PA6NE21 464 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 FAM90A16PA6NEW6 464 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 FAM90A20PA6NIJ5 464 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 FAM90A9PA6NNJ1 464 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 SERPINE3A8MV23 424 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 FAM90A12PA8MX19 464 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 FAM90A5PA8MXJ8 464 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 DEGS1O15121 323 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 KDM4BO94953 1096 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 IGKV1D-12P01611 117 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 CSN2P05814 226 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 SNRNP70P08621 437 aaKnown RBP13.13□□□□□ -0.31
CMTM3-205ENST00000562707 FAM90A15PP0C7V4 464 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 FAM90A13PP0C7W8 464 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 FAM90A14PP0C7W9 464 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 FAM90A24PP0C7X0 464 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 SLC35B1P78383 322 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 BNIP1Q12981 228 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 TMED1Q13445 227 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 HES1Q14469 280 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 DNAL1Q4LDG9 190 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 TP53I3Q53FA7 332 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 C8orf86Q6ZUL3 223 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 COMMD1Q8N668 190 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 ZNF565Q8N9K5 539 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 HRASLS5Q96KN8 279 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 NEK6Q9HC98 313 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 POMPQ9Y244 141 aa13.13□□□□□ -0.31
CMTM3-205ENST00000562707 RYR3Q15413 4870 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 KBTBD11-OT1A0A1B0GTJ5 212 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 TMEM11P17152 192 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 GP2P55259 537 aaKnown RBP13.12□□□□□ -0.31
CMTM3-205ENST00000562707 C17orf58Q2M2W7 97 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 KDM4DQ6B0I6 523 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 ZDHHC13Q8IUH4 622 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 SAXO1Q8IYX7 474 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 KLHL30-AS1Q8NEE0 82 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 OR2G2Q8NGZ5 317 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 OR56B4Q8NH76 319 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 TFAP2CQ92754 450 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 RFKQ969G6 155 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 COQ2Q96H96 371 aa13.12□□□□□ -0.31
CMTM3-205ENST00000562707 NOL4LQ96MY1 436 aaPredicted RBP13.12□□□□□ -0.31
CMTM3-205ENST00000562707 SLC33A1O00400 549 aaPredicted RBP13.11□□□□□ -0.31
CMTM3-205ENST00000562707 FGF16O43320 207 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 RAMP3O60896 148 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 ISG15P05161 165 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 ISL1P61371 349 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 ZNF85Q03923 595 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 HNF4GQ14541 408 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 ATXN7L3Q14CW9 347 aaPredicted RBP13.11□□□□□ -0.31
CMTM3-205ENST00000562707 Q6P435 159 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 C18orf65Q6ZTR6 163 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 KCTD20Q7Z5Y7 419 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 ZNF695Q8IW36 515 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 FOXRED2Q8IWF2 684 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 DRAM1Q8N682 238 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 C5orf56Q8N8D9 126 aa13.11□□□□□ -0.31
CMTM3-205ENST00000562707 OR5D18Q8NGL1 313 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms