RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 A0A1W2PP11 408 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 TCF21O43680 179 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 CALRP27797 417 aaKnown RBP13.72□□□□□ -0.21
CLK3-207ENST00000562389 P2RX3P56373 397 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 SCN1BQ07699 218 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 EDDM3AQ14507 147 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 USP43Q70EL4 1123 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 ZNF418Q8TF45 676 aaPredicted RBP13.72□□□□□ -0.21
CLK3-207ENST00000562389 TNFRSF14Q92956 283 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 LHX4Q969G2 390 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 SLC6A7Q99884 636 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 SUCNR1Q9BXA5 334 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 MS4A7Q9GZW8 240 aaPredicted RBP13.72□□□□□ -0.21
CLK3-207ENST00000562389 PPA2Q9H2U2 334 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 OCEL1Q9H607 264 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 SIRT7Q9NRC8 400 aa13.72□□□□□ -0.21
CLK3-207ENST00000562389 JMJD1CQ15652 2540 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 A0A087WXM4 84 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 TRAV24A0A0B4J272 114 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 IGHV1-69DA0A0B4J2H0 117 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 hADV38S2A0JD32 116 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 FUOMA2VDF0 154 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 IGHV1-69P01742 117 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 UBBP0CG47 229 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 PRTN3P24158 256 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 DLX6P56179 175 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 MPV17LQ2QL34 196 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 NCR3LG1Q68D85 454 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 TCF23Q7RTU1 214 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 C11orf42Q8N5U0 333 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 TPRX1Q8N7U7 411 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 TSPAN14Q8NG11 270 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 C22orf15Q8WYQ4 148 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 GFI1Q99684 422 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 ZNF696Q9H7X3 374 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 LINC00312Q9Y6C7 94 aa13.71□□□□□ -0.21
CLK3-207ENST00000562389 TRAV1-2A0A0B4J238 106 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 hCG_1809904A0A1W2PP81 198 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 A0A1W2PPE2 198 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 A0A1W2PR64 198 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 A0A1W2PRV1 198 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 C17orf98A8MV24 154 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 GEMIN2O14893 280 aaKnown RBP13.7□□□□□ -0.22
CLK3-207ENST00000562389 SLC22A1O15245 554 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 RBP4P02753 201 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 CCL3L1P16619 93 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 HTR2CP28335 458 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 KCNJ3P48549 501 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 PAX5Q02548 391 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 GUCA2AQ02747 115 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 NEDD8Q15843 81 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 PAN3Q58A45 887 aaKnown RBP13.7□□□□□ -0.22
CLK3-207ENST00000562389 BRD3OSQ6XYD6 125 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 BCL6BQ8N143 479 aaPredicted RBP13.7□□□□□ -0.22
CLK3-207ENST00000562389 OR6M1Q8NGM8 313 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 COQ2Q96H96 371 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 ZNF714Q96N38 554 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 CST11Q9H112 138 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 STUB1Q9UNE7 303 aa13.7□□□□□ -0.22
CLK3-207ENST00000562389 AK6Q9Y3D8 172 aaKnown RBP13.7□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A10PA6NDY2 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A18PA6NE21 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A16PA6NEW6 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A20PA6NIJ5 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A8PA6NJQ4 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A7PA6NKC0 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A22PA8MWA6 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A12PA8MX19 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A5PA8MXJ8 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A23PA8MXZ1 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 RNASEK-C17orf49H0YIS7 233 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 SLC17A2O00624 439 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 CRTAPO75718 401 aaPredicted RBP13.69□□□□□ -0.22
CLK3-207ENST00000562389 OR7C1O76099 320 aaPredicted RBP13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A15PP0C7V4 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A13PP0C7W8 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A14PP0C7W9 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FAM90A24PP0C7X0 464 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 ZNF728P0DKX0 622 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 MGMTP16455 207 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 FGF9P31371 208 aaPredicted RBP13.69□□□□□ -0.22
CLK3-207ENST00000562389 DLX1P56177 255 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 HILS1P60008 231 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 AESQ08117 197 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 ATXN7L3Q14CW9 347 aaPredicted RBP13.69□□□□□ -0.22
CLK3-207ENST00000562389 TAF9Q16594 264 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 KRBOX4Q5JUW0 171 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 RUSC1-AS1Q66K80 236 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 SUMF2Q8NBJ7 301 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 TMEM104Q8NE00 496 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 Q96M66 194 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 DPCDQ9BVM2 203 aaPredicted RBP13.69□□□□□ -0.22
CLK3-207ENST00000562389 BANF2Q9H503 90 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 ZNF581Q9P0T4 197 aa13.69□□□□□ -0.22
CLK3-207ENST00000562389 UBE2J1Q9Y385 318 aaPredicted RBP13.69□□□□□ -0.22
CLK3-207ENST00000562389 HSPB6O14558 160 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 PDCD5O14737 125 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 BPNT1O95861 308 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 VSIG8P0DPA2 414 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 MYL9P24844 172 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms