RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 FAM27BQ5VT28 67 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 ZNF574Q6ZN55 896 aaPredicted RBP12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 DPPA2Q7Z7J5 298 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 CYB561D1Q8N8Q1 229 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 CADM4Q8NFZ8 388 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 SPIN2AQ99865 258 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 SPIN2BQ9BPZ2 258 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 TMEM222Q9H0R3 208 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 WSB1Q9Y6I7 421 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 CRYGSP22914 178 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 MRPS34P82930 218 aaKnown RBP12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 RUNX1Q01196 453 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 ELOBQ15370 118 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 AKR1C8PQ5T2L2 129 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 PLCXD3Q63HM9 321 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 TBC1D26Q86UD7 250 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 OR1F12Q8NHA8 337 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 PIGCQ92535 297 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 NIPSNAP3BQ9BS92 247 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 P4HTMQ9NXG6 502 aa12.08□□□□□ -0.48
VPS9D1-202ENST00000561976 IFITM10A6NMD0 228 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 TNFSF11O14788 317 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 ADAM20O43506 726 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 RAB30Q15771 203 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 TVP23CQ96ET8 276 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 GPHA2Q96T91 129 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 LYRM2Q9NU23 88 aaPredicted RBP12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 DKKL1Q9UK85 242 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 EML6Q6ZMW3 1958 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 TGIF2-C20orf24A0A0A6YYL0 155 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 ZNF729A6NN14 1252 aaPredicted RBP12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 TERTO14746 1132 aaKnown RBP12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 CYB5BO43169 146 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 SCAF4O95104 1147 aaKnown RBP12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 SLC34A2O95436 690 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 CELA2AP08217 269 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 RPL23AP62750 156 aaKnown RBP12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 ASCL4Q6XD76 172 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 ZNF100Q8IYN0 542 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 ZNF383Q8NA42 475 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 GLRX2Q9NS18 164 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 SLC7A10Q9NS82 523 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 FOXD3Q9UJU5 478 aaPredicted RBP12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 CA14Q9ULX7 337 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 A0A087WZY1 265 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 PROB1E7EW31 1015 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 SYNGR3O43761 229 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 FUT3P21217 361 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 GNRHRP30968 328 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 ICAM4Q14773 271 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 PDZD11Q5EBL8 140 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 TMEM211Q6ICI0 200 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 Q6ZPA2 131 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 FAM185AQ8N0U4 392 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 ZIC4Q8N9L1 334 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 OR8G5Q8NG78 346 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 OR10D4PQ8NGN7 298 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 CPNE4Q96A23 557 aaPredicted RBP12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 GNPNAT1Q96EK6 184 aaPredicted RBP12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 C11orf1Q9H5F2 150 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 CRLF2Q9HC73 371 aa12.07□□□□□ -0.48
VPS9D1-202ENST00000561976 A0A087WWC5 75 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 ATXN7O15265 892 aaPredicted RBP12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 NDUFS6O75380 124 aaKnown RBP12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 B4GALT1P15291 398 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 ZNF32P17041 273 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 FUT6P51993 359 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 RBM11P57052 281 aaKnown RBP12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 ERVFRD-1P60508 538 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 SPNS3Q6ZMD2 512 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 C5orf24Q7Z6I8 188 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 CMTM1Q8IZ96 169 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 AKIRIN1Q9H9L7 192 aaPredicted RBP12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 TREM2Q9NZC2 230 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 DKK1O94907 266 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 DEFA6Q01524 100 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 TLE4Q04727 773 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 OR8B8Q15620 311 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 SELENOHQ8IZQ5 122 aaKnown RBP12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 IL22RA1Q8N6P7 574 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 FAM86C1Q9NVL1 165 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 PARPBPQ9NWS1 579 aa12.06□□□□□ -0.48
VPS9D1-202ENST00000561976 A0A0J9YW62 118 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 HSPB1P04792 205 aaKnown RBP12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 CCL3P10147 92 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 EPHA1P21709 976 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 NKX6-1P78426 367 aaPredicted RBP12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 ZNF154Q13106 437 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 SLC25A24Q6NUK1 477 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 WDR5BQ86VZ2 330 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 HIST1H2BKO60814 126 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 TRGC2P03986 189 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 TK1P04183 234 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 HIST1H2BJP06899 126 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 HIST1H2BOP23527 126 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 HIST1H2BBP33778 126 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 DSCR4P56555 118 aaPredicted RBP12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 HIST1H2BDP58876 126 aa12.05□□□□□ -0.48
VPS9D1-202ENST00000561976 HIST1H2BCP62807 126 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms