RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 SHANK1Q9Y566 2161 aa8.37□□□□□ -1.07
SMG1-205ENST00000561947 LRP5LA4QPB2 252 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 MFSD2BA6NFX1 497 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 HSPB6O14558 160 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 RHBDL1O75783 438 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 IFNA21P01568 189 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 OR5AC1P0C628 307 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 RAC2P15153 192 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 HOXC12P31275 282 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 NUP62P37198 522 aaPredicted RBP8.36□□□□□ -1.07
SMG1-205ENST00000561947 ERVS71-1P61550 626 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 FOXF2Q12947 444 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 IAH1Q2TAA2 248 aaPredicted RBP8.36□□□□□ -1.07
SMG1-205ENST00000561947 GGNBP1Q5YKI7 109 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 IGFL3Q6UXB1 125 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 WDR86Q86TI4 376 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 CCDC28AQ8IWP9 274 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 CCDC71LQ8N9Z2 235 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 WDR31Q8NA23 367 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 RELL2Q8NC24 303 aaPredicted RBP8.36□□□□□ -1.07
SMG1-205ENST00000561947 OR5T2Q8NGG2 359 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 OR1J1Q8NGS3 322 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 GTF3AQ92664 365 aaKnown RBP8.36□□□□□ -1.07
SMG1-205ENST00000561947 SYT3Q9BQG1 590 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 RHOFQ9HBH0 211 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 KIR2DS1A0A191URI9 304 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 IQCF6A8MYZ5 107 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 TRDCB7Z8K6 153 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 IGKV3-15P01624 115 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 GLAP06280 429 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 ZNF250P15622 560 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 KIR2DS4P43632 304 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 UCP2P55851 309 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 S100A10P60903 97 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 KIR2DS1Q14954 304 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 IGFBP7Q16270 282 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 SP6Q3SY56 376 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 C17orf78Q8N4C9 275 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 LRTM2Q8N967 370 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 OR11L1Q8NGX0 322 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 STOML3Q8TAV4 291 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 AQP10Q96PS8 301 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 PRRX2Q99811 253 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 ADAT1Q9BUB4 502 aaKnown RBP8.36□□□□□ -1.07
SMG1-205ENST00000561947 RIMS4Q9H426 269 aaPredicted RBP8.36□□□□□ -1.07
SMG1-205ENST00000561947 IFT22Q9H7X7 185 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 PLSCR4Q9NRQ2 329 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 DNAJB11Q9UBS4 358 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 TUBD1Q9UJT1 453 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 TRBV6-6A0A0A6YYG2 114 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 TRAV24A0A0B4J272 114 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 MSGN1A6NI15 193 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 SHOXO15266 292 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 DIRAS3O95661 229 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 SCTP09683 121 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 SELEP16581 610 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 FAM76BQ5HYJ3 339 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 FAM74A1Q5RGS3 127 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 ZNF585AQ6P3V2 769 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 UNQ6126/PRO20091Q6UXV3 157 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 LIAT1Q6ZQX7 453 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 FAM219AQ8IW50 185 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 MRPL30Q8TCC3 161 aaKnown RBP8.36□□□□□ -1.07
SMG1-205ENST00000561947 DKK4Q9UBT3 224 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 ATP23Q9Y6H3 246 aa8.36□□□□□ -1.07
SMG1-205ENST00000561947 A0A1B0GW55 424 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 HS3ST1O14792 307 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 GPR37O15354 613 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 AGFG2O95081 481 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 SLC34A2O95436 690 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 TK1P04183 234 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 DUX4L2P0CJ85 424 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 DUX4L3P0CJ86 424 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 DUX4L4P0CJ87 422 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 DUX4L5P0CJ88 424 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 DUX4L6P0CJ89 424 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 DUX4L7P0CJ90 424 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 EIF2S3P41091 472 aaKnown RBP8.35□□□□□ -1.07
SMG1-205ENST00000561947 HERPUD1Q15011 391 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 ALKBH6Q3KRA9 238 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 C5orf24Q7Z6I8 188 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 Q8IYB0 196 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 FAM185AQ8N0U4 392 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 SCCPDHQ8NBX0 429 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 C18orf12Q96KH6 178 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 CNTNAP3BQ96NU0 1288 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 C1QTNF6Q9BXI9 259 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 CNTNAP3Q9BZ76 1288 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 SHARPINQ9H0F6 387 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 DUX4Q9UBX2 424 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 PROCRQ9UNN8 238 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 POLDIP2Q9Y2S7 368 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 ZFHX4Q86UP3 3567 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 DMXL1Q9Y485 3027 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 C3orf80F5H4A9 247 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 BET1O15155 118 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 WDR1O75083 606 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 TNFSF13O75888 250 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 CTXN2P0C2S0 81 aa8.35□□□□□ -1.07
SMG1-205ENST00000561947 TPT1P13693 172 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms