RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 ING2Q9H160 280 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 STMN4Q9H169 189 aaPredicted RBP3.47□□□□□ -1.85
SMG1-204ENST00000561940 HAUS4Q9H6D7 363 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 DDIT4Q9NX09 232 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 STMN3Q9NZ72 180 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 STK38LQ9Y2H1 464 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 LAMB1P07942 1786 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 NAV2Q8IVL1 2488 aa3.47□□□□□ -1.85
SMG1-204ENST00000561940 EP300Q09472 2414 aaPredicted RBP3.46□□□□□ -1.85
SMG1-204ENST00000561940 CDH23Q9H251 3354 aa3.46□□□□□ -1.85
SMG1-204ENST00000561940 FAM240AA0A1B0GVK7 77 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 SEC14L6B5MCN3 397 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 IGKV1D-16P01601 117 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 IVLP07476 585 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 TAS2R60P59551 318 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 PPP1CAP62136 330 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 FAM222AQ5U5X8 452 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 SLC25A34Q6PIV7 304 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 COPS6Q7L5N1 327 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 STK40Q8N2I9 435 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 TRIML2Q8N7C3 387 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 SLC35G3Q8N808 338 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 SLC25A29Q8N8R3 303 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 PHOSPHO2Q8TCD6 241 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 GPR82Q96P67 336 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 PRRG3Q9BZD7 231 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 ENPP4Q9Y6X5 453 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 MIA3Q5JRA6 1907 aa3.46□□□□□ -1.86
SMG1-204ENST00000561940 PRRC2BQ5JSZ5 2229 aaKnown RBP3.46□□□□□ -1.86
SMG1-204ENST00000561940 LOC102724200A0A096LPH7 203 aaPredicted RBP3.45□□□□□ -1.86
SMG1-204ENST00000561940 SPRR5A0A1B0GTR4 108 aa3.45□□□□□ -1.86
SMG1-204ENST00000561940 H7C2Y5 167 aa3.45□□□□□ -1.86
SMG1-204ENST00000561940 PRMT5O14744 637 aaPredicted RBP3.45□□□□□ -1.86
SMG1-204ENST00000561940 SC5DO75845 299 aa3.45□□□□□ -1.86
SMG1-204ENST00000561940 MMP7P09237 267 aaPredicted RBP3.45□□□□□ -1.86
SMG1-204ENST00000561940 ZNF14P17017 642 aaPredicted RBP3.45□□□□□ -1.86
SMG1-204ENST00000561940 GRB2P62993 217 aaKnown RBP3.45□□□□□ -1.86
SMG1-204ENST00000561940 KRTAP13-2Q52LG2 175 aa3.45□□□□□ -1.86
SMG1-204ENST00000561940 DNLZQ5SXM8 178 aa3.45□□□□□ -1.86
SMG1-204ENST00000561940 THOC7Q6I9Y2 204 aaKnown RBP3.45□□□□□ -1.86
SMG1-204ENST00000561940 APOBEC3HQ6NTF7 200 aaKnown RBP3.45□□□□□ -1.86
SMG1-204ENST00000561940 SETD3Q86TU7 594 aaPredicted RBP3.45□□□□□ -1.86
SMG1-204ENST00000561940 ST20-AS1Q8NBB2 130 aa3.45□□□□□ -1.86
SMG1-204ENST00000561940 RMI2Q96E14 147 aa3.45□□□□□ -1.86
SMG1-204ENST00000561940 SNF8Q96H20 258 aa3.45□□□□□ -1.86
SMG1-204ENST00000561940 LINC00574Q9H8X3 128 aa3.45□□□□□ -1.86
SMG1-204ENST00000561940 RBMX2Q9Y388 322 aaKnown RBP3.45□□□□□ -1.86
SMG1-204ENST00000561940 ORC6Q9Y5N6 252 aa3.45□□□□□ -1.86
SMG1-204ENST00000561940 WIF1Q9Y5W5 379 aa3.45□□□□□ -1.86
SMG1-204ENST00000561940 DCHS1Q96JQ0 3298 aa3.45□□□□□ -1.86
SMG1-204ENST00000561940 MAP1BP46821 2468 aaKnown RBP3.44□□□□□ -1.86
SMG1-204ENST00000561940 IGKV1-6A0A0C4DH72 117 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 ANKRD20A5PA0PJZ0 165 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 E7EWF7 191 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 M0R1B8 84 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 NDUFS5O43920 106 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 IGKV1-39P01597 117 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 IGKV1D-39P04432 117 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 OR5AL1P0C617 328 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 NTF3P20783 257 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 PSMB5P28074 263 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 PRSS3P35030 304 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 DEKP35659 375 aaKnown RBP3.44□□□□□ -1.86
SMG1-204ENST00000561940 ARR3P36575 388 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 MAD2L1BPQ15013 274 aaPredicted RBP3.44□□□□□ -1.86
SMG1-204ENST00000561940 VAMP3Q15836 100 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 OR2M7Q8NG81 312 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 SFXN5Q8TD22 340 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 HGDQ93099 445 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 MSANTD3Q96H12 275 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 IP6K3Q96PC2 410 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 ULBP2Q9BZM5 246 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 SND1-IT1Q9HBX3 110 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 CSNK1G1Q9HCP0 422 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 C6orf50Q9HD87 102 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 MARCOQ9UEW3 520 aaPredicted RBP3.44□□□□□ -1.86
SMG1-204ENST00000561940 ZNF229Q9UJW7 825 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 CFL2Q9Y281 166 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 DDX60LQ5H9U9 1706 aaKnown RBP3.44□□□□□ -1.86
SMG1-204ENST00000561940 USP34Q70CQ2 3546 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 TECTAO75443 2155 aa3.44□□□□□ -1.86
SMG1-204ENST00000561940 SCN9AQ15858 1988 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 ZNF292O60281 2723 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 UBR2Q8IWV8 1755 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 WDFY4Q6ZS81 3184 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 ASH1LQ9NR48 2969 aaKnown RBP3.43□□□□□ -1.86
SMG1-204ENST00000561940 ISPDA4D126 451 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 CEACAM18A8MTB9 384 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 CENPBD1B2RD01 187 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 DHRS3O75911 302 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 VAPBO95292 243 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 CYBAP13498 195 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 NELFEP18615 380 aaKnown RBP3.43□□□□□ -1.86
SMG1-204ENST00000561940 ERFP50548 548 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 IL5RAQ01344 420 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 ADIGQ0VDE8 80 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 TTC32Q5I0X7 151 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 HHATQ5VTY9 493 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 IGFL1Q6UW32 110 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 SYS1Q8N2H4 156 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms