RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 CX3CR1P49238 355 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 RORCP51449 518 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 TAS2R43P59537 309 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 RPL31P62899 125 aaKnown RBP7.9□□□□□ -1.14
TPM1-225ENST00000560679 ZNF45Q02386 682 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 PRDX4Q13162 271 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 GPR50Q13585 617 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 GALEQ14376 348 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 TRIM16LQ309B1 348 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 FAM76BQ5HYJ3 339 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 KHDC1LQ5JSQ8 128 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 C22orf42Q6IC83 251 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 CCDC190Q86UF4 302 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 ZFP41Q8N8Y5 198 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 OR10H4Q8NGA5 316 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 OR4M1Q8NGD0 313 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 OR51L1Q8NGJ5 315 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 TEAD3Q99594 435 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 RTL8AQ9BWD3 113 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 MROQ9BYG7 248 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 OR51V1Q9H2C8 321 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 ADGRL4Q9HBW9 690 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 CENPMQ9NSP4 180 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 DAPK2Q9UIK4 370 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 GSTK1Q9Y2Q3 226 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 PLECQ15149 4684 aaKnown RBP7.9□□□□□ -1.15
TPM1-225ENST00000560679 ANXA2P2A6NMY6 339 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 ZNF850A8MQ14 1090 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 FAM90A22PA8MWA6 464 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 ZNF878C9JN71 531 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 MAGEB3O15480 346 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 UPK1BO75841 260 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 ANXA2P07355 339 aaKnown RBP7.89□□□□□ -1.15
TPM1-225ENST00000560679 MRPL3P09001 348 aaKnown RBP7.89□□□□□ -1.15
TPM1-225ENST00000560679 SPARCP09486 303 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 GALP22466 123 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 GLRA1P23415 457 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 CEBPDP49716 269 aaPredicted RBP7.89□□□□□ -1.15
TPM1-225ENST00000560679 THBS3P49746 956 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 CAPZA1P52907 286 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 DGCR2P98153 550 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 FABP5Q01469 135 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 IFITM3Q01628 133 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 OXA1LQ15070 435 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 GFOD2Q3B7J2 385 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 SLC35D3Q5M8T2 416 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 SPANXN2Q5MJ10 180 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 C18orf65Q6ZTR6 163 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 CENPVQ7Z7K6 275 aaPredicted RBP7.89□□□□□ -1.15
TPM1-225ENST00000560679 CD177Q8N6Q3 437 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 CSNK2A3Q8NEV1 391 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 OR4X2Q8NGF9 303 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 TMEM203Q969S6 136 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 SLC25A46Q96AG3 418 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 MALSU1Q96EH3 234 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 PRR25Q96S07 402 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 CNN2Q99439 309 aaKnown RBP7.89□□□□□ -1.15
TPM1-225ENST00000560679 TBX5Q99593 518 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 BARHL1Q9BZE3 327 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 NMNAT2Q9BZQ4 307 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 BABAM2Q9NXR7 383 aa7.89□□□□□ -1.15
TPM1-225ENST00000560679 DSCAML1Q8TD84 2053 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 SH2D7A6NKC9 451 aaPredicted RBP7.88□□□□□ -1.15
TPM1-225ENST00000560679 C17orf98A8MV24 154 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 GABRPO00591 440 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 CTDSP2O14595 271 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 PFDN1O60925 122 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 MTRF1O75570 445 aaKnown RBP7.88□□□□□ -1.15
TPM1-225ENST00000560679 ZFPL1O95159 310 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 GYPBP06028 91 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 LPLP06858 475 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 CLEC2LP0C7M8 214 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 CLUP10909 449 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 SPI1P17947 270 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 CELP19835 753 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 ZNF121P58317 390 aaPredicted RBP7.88□□□□□ -1.15
TPM1-225ENST00000560679 ZNF85Q03923 595 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 TRAM1Q15629 374 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 FAM57BQ71RH2 274 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 PARP16Q8N5Y8 322 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 OR11H6Q8NGC7 330 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 PPP1R14BQ96C90 147 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 MRPL48Q96GC5 212 aaKnown RBP7.88□□□□□ -1.15
TPM1-225ENST00000560679 CEP19Q96LK0 163 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 TMED9Q9BVK6 235 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 ISG20L2Q9H9L3 353 aaKnown RBP7.88□□□□□ -1.15
TPM1-225ENST00000560679 ETAA1Q9NY74 926 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 HILPDAQ9Y5L2 63 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 MPC1Q9Y5U8 109 aa7.88□□□□□ -1.15
TPM1-225ENST00000560679 A0A1W2PPH5 198 aa7.87□□□□□ -1.15
TPM1-225ENST00000560679 MEX3AA1L020 520 aaKnown RBP7.87□□□□□ -1.15
TPM1-225ENST00000560679 RFPL4AA6NLU0 287 aa7.87□□□□□ -1.15
TPM1-225ENST00000560679 RFPL4AL1F8VTS6 287 aa7.87□□□□□ -1.15
TPM1-225ENST00000560679 CST4P01036 141 aa7.87□□□□□ -1.15
TPM1-225ENST00000560679 AMY1AP04745 511 aa7.87□□□□□ -1.15
TPM1-225ENST00000560679 AMY2AP04746 511 aa7.87□□□□□ -1.15
TPM1-225ENST00000560679 OR2T7P0C7T2 308 aa7.87□□□□□ -1.15
TPM1-225ENST00000560679 AZGP1P25311 298 aaKnown RBP7.87□□□□□ -1.15
TPM1-225ENST00000560679 TNFSF8P32971 234 aa7.87□□□□□ -1.15
TPM1-225ENST00000560679 SDC2P34741 201 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms