RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 TBX15Q96SF7 602 aa12.77□□□□□ -0.37
LYSMD2-204ENST00000560491 RNF167Q9H6Y7 350 aa12.77□□□□□ -0.37
LYSMD2-204ENST00000560491 PLGRKTQ9HBL7 147 aa12.77□□□□□ -0.37
LYSMD2-204ENST00000560491 ING3Q9NXR8 418 aa12.77□□□□□ -0.37
LYSMD2-204ENST00000560491 TRAV24A0A0B4J272 114 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 TRAV40A0A0B4J280 105 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 SLC17A2O00624 439 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 OR7C1O76099 320 aaPredicted RBP12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 FAM157CP0CG43 387 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 IGHV4-38-2P0DP08 117 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 VSIG8P0DPA2 414 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 MGMTP16455 207 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 ATXN7L3Q14CW9 347 aaPredicted RBP12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 TAF9Q16594 264 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 HES5Q5TA89 166 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 TMEM200BQ69YZ2 307 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 TCF23Q7RTU1 214 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 Q8N7P7 452 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 CHST4Q8NCG5 386 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 OR5D13Q8NGL4 314 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 PPP1R35Q8TAP8 253 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 NANPQ8TBE9 248 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 YIPF6Q96EC8 236 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 CENPOQ9BU64 300 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 SELENOIQ9C0D9 397 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 SIRT7Q9NRC8 400 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 PCDHB16Q9NRJ7 776 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 KPTNQ9Y664 436 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 V9GY05 133 aa12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 SETD2Q9BYW2 2564 aaPredicted RBP12.76□□□□□ -0.37
LYSMD2-204ENST00000560491 PDCD5O14737 125 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 MGST3O14880 152 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 MPIG6BO95866 241 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 UBBP0CG47 229 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 CCL3L1P16619 93 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 RAB3BP20337 219 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 AESQ08117 197 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 UNC119Q13432 240 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 RAB11BQ15907 218 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 PAN3Q58A45 887 aaKnown RBP12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 VMO1Q7Z5L0 202 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 LINC00596Q86U02 117 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 NR2C2APQ86WQ0 139 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 BPIFB2Q8N4F0 458 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 TEX29Q8N6K0 151 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 KIR3DL3Q8N743 410 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 SUMF2Q8NBJ7 301 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 COQ2Q96H96 371 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 CYYR1Q96J86 154 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 CST11Q9H112 138 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 GHRLQ9UBU3 117 aa12.75□□□□□ -0.37
LYSMD2-204ENST00000560491 BPNT1O95861 308 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 TGFBR1P36897 503 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 GLIPR1P48060 266 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 P2RX3P56373 397 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 QRFPP83859 136 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 MPV17LQ2QL34 196 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 ATAD3CQ5T2N8 411 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 BRICD5Q6PL45 260 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 PDZD9Q8IXQ8 264 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 CMTM4Q8IZR5 234 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 OR51D1Q8NGF3 324 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 C22orf15Q8WYQ4 148 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 MRPS24Q96EL2 167 aaKnown RBP12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 Q96M66 194 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 KCTD7Q96MP8 289 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 DPCDQ9BVM2 203 aaPredicted RBP12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 MRPS26Q9BYN8 205 aaKnown RBP12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 IFT22Q9H7X7 185 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 MXRA5Q9NR99 2828 aa12.74□□□□□ -0.37
LYSMD2-204ENST00000560491 TMEM14DPA8MWL7 114 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 CSN2P05814 226 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 ARSBP15848 533 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 EPHA1P21709 976 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 SDC2P34741 201 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 PSMD7P51665 324 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 ERVFRD-1P60508 538 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 KLRD1Q13241 179 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 KRBOX4Q5JUW0 171 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 PLPPR1Q8TBJ4 325 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 LHX4Q969G2 390 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 POM121Q96HA1 1249 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 DMRTB1Q96MA1 342 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 TMEM59Q9BXS4 323 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 STEAP1Q9UHE8 339 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 NUP50Q9UKX7 468 aa12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 SOX21Q9Y651 276 aaPredicted RBP12.73□□□□□ -0.37
LYSMD2-204ENST00000560491 A0A0B4J203 849 aa12.72□□□□□ -0.37
LYSMD2-204ENST00000560491 hADV38S2A0JD32 116 aa12.72□□□□□ -0.37
LYSMD2-204ENST00000560491 ODAMA1E959 279 aa12.72□□□□□ -0.37
LYSMD2-204ENST00000560491 IFITM5A6NNB3 132 aa12.72□□□□□ -0.37
LYSMD2-204ENST00000560491 M0R1W7 72 aa12.72□□□□□ -0.37
LYSMD2-204ENST00000560491 AIREO43918 545 aa12.72□□□□□ -0.37
LYSMD2-204ENST00000560491 CLEC2LP0C7M8 214 aa12.72□□□□□ -0.37
LYSMD2-204ENST00000560491 SLC2A2P11168 524 aaPredicted RBP12.72□□□□□ -0.37
LYSMD2-204ENST00000560491 ERP29P30040 261 aaKnown RBP12.72□□□□□ -0.37
LYSMD2-204ENST00000560491 DLX6P56179 175 aa12.72□□□□□ -0.37
LYSMD2-204ENST00000560491 RIPPLY3P57055 190 aa12.72□□□□□ -0.37
LYSMD2-204ENST00000560491 LSM3P62310 102 aaKnown RBP12.72□□□□□ -0.37
LYSMD2-204ENST00000560491 RPS27AP62979 156 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms