RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 MCRIP1C9JLW8 97 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 RHBDL1O75783 438 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 SFTPBP07988 381 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 GSTP1P09211 210 aaKnown RBP9.87□□□□□ -0.83
LDLR-212ENST00000560467 EFNB2P52799 333 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 DVL1P1P54792 670 aaPredicted RBP9.87□□□□□ -0.83
LDLR-212ENST00000560467 RBM11P57052 281 aaKnown RBP9.87□□□□□ -0.83
LDLR-212ENST00000560467 TAS2R20P59543 309 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 DEFA1P59665 94 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 DEFA3P59666 94 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 AP3S2P59780 193 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 GMFBP60983 142 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 UNC119Q13432 240 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 IL13RA2Q14627 380 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 MPPED2Q15777 294 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 TAF9Q16594 264 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 PNLIPRP3Q17RR3 467 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 MICBQ29980 383 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 CDNFQ49AH0 187 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 NHLRC3Q5JS37 347 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 HACD4Q5VWC8 232 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 WDR82Q6UXN9 313 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 FAM89BQ8N5H3 189 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 Q8NFD4 153 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 NEK7Q8TDX7 302 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 GTF3AQ92664 365 aaKnown RBP9.87□□□□□ -0.83
LDLR-212ENST00000560467 TIMD4Q96H15 378 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 NARFLQ9H6Q4 476 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 SCPEP1Q9HB40 452 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 LPAR2Q9HBW0 351 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 GCM1Q9NP62 436 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 PALMDQ9NP74 551 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 RBFOX1Q9NWB1 397 aaKnown RBP9.87□□□□□ -0.83
LDLR-212ENST00000560467 TAS2R8Q9NYW2 309 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 METRNQ9UJH8 293 aa9.87□□□□□ -0.83
LDLR-212ENST00000560467 TRAV38-1A0A0B4J264 116 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 IGKV1-12A0A0C4DH73 117 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 IGHV1-69-2A0A0G2JMI3 117 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 A0A0G2JMP0 313 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 A0A0X1KG70 313 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 CENPXA8MT69 81 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 SULT1C2O00338 296 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 KCNAB3O43448 404 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 PDCD6O75340 191 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 RBBP9O75884 186 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 KNG1P01042 644 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 IGKV1D-12P01611 117 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 GLAP06280 429 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 CD3GP09693 182 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 ZNF44P15621 663 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 MUC1P15941 1255 aaPredicted RBP9.86□□□□□ -0.83
LDLR-212ENST00000560467 CBX5P45973 191 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 NPBWR2P48146 333 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 SNU13P55769 128 aaKnown RBP9.86□□□□□ -0.83
LDLR-212ENST00000560467 ACTG1P63261 375 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 MRPS11P82912 194 aaKnown RBP9.86□□□□□ -0.83
LDLR-212ENST00000560467 ZNF181Q2M3W8 571 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 TMEM255AQ5JRV8 349 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 ZNF826PQ6ZT77 177 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 RNF144BQ7Z419 303 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 WDR86Q86TI4 376 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 IZUMO1Q8IYV9 350 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 DTX3Q8N9I9 347 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 OR4M2Q8NGB6 313 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 RDH5Q92781 318 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 Q96M66 194 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 C1orf147Q96MC9 270 aaPredicted RBP9.86□□□□□ -0.83
LDLR-212ENST00000560467 FGF23Q9GZV9 251 aaPredicted RBP9.86□□□□□ -0.83
LDLR-212ENST00000560467 RIMS4Q9H426 269 aaPredicted RBP9.86□□□□□ -0.83
LDLR-212ENST00000560467 KCNK15Q9H427 330 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 IFT46Q9NQC8 304 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 OR14J1Q9UGF5 321 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 HSF4Q9ULV5 492 aa9.86□□□□□ -0.83
LDLR-212ENST00000560467 A0A1W2PP11 408 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 NKX6-3A6NJ46 265 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 GABARAPH6UMI1 98 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 GEMIN2O14893 280 aaKnown RBP9.85□□□□□ -0.83
LDLR-212ENST00000560467 CTDSPLO15194 276 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 ECDO95905 644 aaPredicted RBP9.85□□□□□ -0.83
LDLR-212ENST00000560467 LPLP06858 475 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 HIST1H1DP16402 221 aaKnown RBP9.85□□□□□ -0.83
LDLR-212ENST00000560467 EGR1P18146 543 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 ACTBP60709 375 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 SSBP1Q04837 148 aaKnown RBP9.85□□□□□ -0.83
LDLR-212ENST00000560467 PIGYQ3MUY2 71 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 ACP7Q6ZNF0 438 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 GLCCI1Q86VQ1 547 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 C11orf53Q8IXP5 236 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 BATF2Q8N1L9 274 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 MFSD4AQ8N468 514 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 ZNF488Q96MN9 340 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 THAP7Q9BT49 309 aaPredicted RBP9.85□□□□□ -0.83
LDLR-212ENST00000560467 AUNIPQ9H7T9 357 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 CHMP1AQ9HD42 196 aaPredicted RBP9.85□□□□□ -0.83
LDLR-212ENST00000560467 TMEM106BQ9NUM4 274 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 NLKQ9UBE8 527 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 WIPI2Q9Y4P8 454 aa9.85□□□□□ -0.83
LDLR-212ENST00000560467 FUOMA2VDF0 154 aa9.84□□□□□ -0.83
LDLR-212ENST00000560467 SRRM5B3KS81 715 aa9.84□□□□□ -0.83
LDLR-212ENST00000560467 B4DSR2 109 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms