RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 AKIP1Q9NQ31 210 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.8□□□□□ -1.16
HERC1-206ENST00000559996 OR14J1Q9UGF5 321 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 ITPR2Q14571 2701 aa7.8□□□□□ -1.16
HERC1-206ENST00000559996 IGHV4-30-2A0A087WSY4 118 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 A0A0A6YYH2 397 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 A6NJ64 397 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 CYSRT1A8MQ03 144 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 CEACAM18A8MTB9 384 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 CLDN25C9JDP6 229 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 K7N7A8 449 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 DEGS1O15121 323 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 SIGLEC5O15389 551 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 RGS5O15539 181 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 PPIHO43447 177 aaKnown RBP7.79□□□□□ -1.16
HERC1-206ENST00000559996 PDCD6O75340 191 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 GNB3P16520 340 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 FUT3P21217 361 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 CPT2P23786 658 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 DNASE1P24855 282 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 MDH2P40926 338 aaKnown RBP7.79□□□□□ -1.16
HERC1-206ENST00000559996 OR3A1P47881 315 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 PDLIM4P50479 330 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 SEC61A1P61619 476 aaKnown RBP7.79□□□□□ -1.16
HERC1-206ENST00000559996 MADCAM1Q13477 382 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 CDNFQ49AH0 187 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 TMEM155Q4W5P6 130 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 Q6ZTK2 550 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 GAPTQ8N292 157 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 FAM216BQ8N7L0 139 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 OR56B1Q8NGI3 324 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 DYRK2Q92630 601 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 S100A16Q96FQ6 103 aaKnown RBP7.79□□□□□ -1.16
HERC1-206ENST00000559996 COQ2Q96H96 371 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 DIRAS2Q96HU8 199 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 DNTTIP1Q9H147 329 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 AUNIPQ9H7T9 357 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 BARX1Q9HBU1 254 aaPredicted RBP7.79□□□□□ -1.16
HERC1-206ENST00000559996 EXTL2Q9UBQ6 330 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 DNAJB11Q9UBS4 358 aa7.79□□□□□ -1.16
HERC1-206ENST00000559996 YLPM1P49750 1951 aaKnown RBP7.79□□□□□ -1.16
HERC1-206ENST00000559996 TRAV18A0A075B6X5 111 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 A0A0G2JMP0 313 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 A0A0X1KG70 313 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 MEIOCA2RUB1 952 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 METTL21EPA6NDL7 271 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 FAM25AB3EWG3 89 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 FAM25CB3EWG5 89 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 FAM25GB3EWG6 89 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 NDUFS8O00217 210 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 SIRPB1O00241 398 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 SSX5O60225 188 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 OR7C1O76099 320 aaPredicted RBP7.78□□□□□ -1.16
HERC1-206ENST00000559996 TPPPO94811 219 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 TK1P04183 234 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 GLAP06280 429 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 CGB3P0DN86 165 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 CGB7P0DN87 165 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 HIST1H1DP16402 221 aaKnown RBP7.78□□□□□ -1.16
HERC1-206ENST00000559996 NR4A2P43354 598 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 GPR6P46095 362 aaPredicted RBP7.78□□□□□ -1.16
HERC1-206ENST00000559996 TAS2R20P59543 309 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 PAX5Q02548 391 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 SCN1BQ07699 218 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 IKZF1Q13422 519 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 SHEQ5VZ18 495 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 RAB12Q6IQ22 244 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 PRSS57Q6UWY2 283 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 DCDC5Q6ZRR9 648 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 C5orf24Q7Z6I8 188 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 ZNF561Q8N587 486 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 CHST4Q8NCG5 386 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 OR4M2Q8NGB6 313 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 CLDND2Q8NHS1 167 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 FAM168AQ92567 244 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 RAB1CQ92928 201 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 GCDHQ92947 438 aaPredicted RBP7.78□□□□□ -1.16
HERC1-206ENST00000559996 RAB3CQ96E17 227 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 SNX22Q96L94 193 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 DPCDQ9BVM2 203 aaPredicted RBP7.78□□□□□ -1.16
HERC1-206ENST00000559996 ZNF665Q9H7R5 613 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 PATZ1Q9HBE1 687 aaKnown RBP7.78□□□□□ -1.16
HERC1-206ENST00000559996 DIABLOQ9NR28 239 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 ASH1LQ9NR48 2969 aaKnown RBP7.78□□□□□ -1.16
HERC1-206ENST00000559996 MED13LQ71F56 2210 aa7.78□□□□□ -1.16
HERC1-206ENST00000559996 ZNF469Q96JG9 3925 aaPredicted RBP7.77□□□□□ -1.17
HERC1-206ENST00000559996 MALRD1Q5VYJ5 2156 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 ARHGAP32A7KAX9 2087 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 AKAP9Q99996 3911 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 IGHV4-61A0A0C4DH41 118 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 UBE2QL1A1L167 161 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 TMEM235A6NFC5 223 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 CTDSPLO15194 276 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 NDUFA2O43678 99 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 LANCL1O43813 399 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 CA11O75493 328 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 NAPSAO96009 420 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 IGHV2-5P01817 119 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 CSN2P05814 226 aa7.77□□□□□ -1.17
HERC1-206ENST00000559996 ZNF44P15621 663 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms