RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 FAM71E2Q8N5Q1 922 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 OR5P3Q8WZ94 311 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 TOMM40LQ969M1 308 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 ARL11Q969Q4 196 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 SLAMF9Q96A28 289 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 MRPL24Q96A35 216 aaKnown RBP6.94□□□□□ -1.3
SMAD3-212ENST00000559937 BOD1Q96IK1 185 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 C18orf12Q96KH6 178 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 LIME1Q9H400 295 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 Q9N2K0 584 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 SLC2A9Q9NRM0 540 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 TAS2R3Q9NYW6 316 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF581Q9P0T4 197 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 CLCF1Q9UBD9 225 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 PRSS50Q9UI38 385 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 LHX6Q9UPM6 363 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 TMED3Q9Y3Q3 217 aa6.94□□□□□ -1.3
SMAD3-212ENST00000559937 CACNA1GO43497 2377 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 MED19A0JLT2 244 aaPredicted RBP6.93□□□□□ -1.3
SMAD3-212ENST00000559937 MSGN1A6NI15 193 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 TRDCB7Z8K6 153 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 E5RGE8 158 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 J3QT63 122 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 TUSC2O75896 110 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 JTBO76095 146 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 CDS2O95674 445 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 PPYP01298 95 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 TK1P04183 234 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 OR5AC1P0C628 307 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 HKR1P10072 659 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 SELEP16581 610 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 CCNOP22674 350 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 AADACP22760 399 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 TUBG1P23258 451 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 DUSP1P28562 367 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 RPL12P30050 165 aaKnown RBP6.93□□□□□ -1.3
SMAD3-212ENST00000559937 MDH2P40926 338 aaKnown RBP6.93□□□□□ -1.3
SMAD3-212ENST00000559937 NPBWR2P48146 333 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 GPM6AP51674 278 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 PRSS12P56730 875 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 S100A10P60903 97 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 BLOC1S1P78537 153 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 MRPL49Q13405 166 aaKnown RBP6.93□□□□□ -1.3
SMAD3-212ENST00000559937 TUSC1Q2TAM9 212 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 GPR157Q5UAW9 335 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 SHEQ5VZ18 495 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 TMEM268Q5VZI3 342 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF880Q6PDB4 577 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 UNQ6126/PRO20091Q6UXV3 157 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 Q6ZPA2 131 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 MOB1BQ7L9L4 216 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 LDLRAD3Q86YD5 345 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 OR1S2Q8NGQ3 325 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 DYRK2Q92630 601 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 MSI2Q96DH6 328 aaKnown RBP6.93□□□□□ -1.3
SMAD3-212ENST00000559937 CCDC120Q96HB5 630 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 DOCK7Q96N67 2140 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 SPIN2AQ99865 258 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 SPIN2BQ9BPZ2 258 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 DEFB127Q9H1M4 99 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF552Q9H707 407 aaPredicted RBP6.93□□□□□ -1.3
SMAD3-212ENST00000559937 MMP26Q9NRE1 261 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 TUBG2Q9NRH3 451 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 PRR13Q9NZ81 148 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 MTCH1Q9NZJ7 389 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 GSKIPQ9P0R6 139 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 SPRR3Q9UBC9 169 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 TMA7Q9Y2S6 64 aaKnown RBP6.93□□□□□ -1.3
SMAD3-212ENST00000559937 NSG2Q9Y328 171 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 SPEF1Q9Y4P9 236 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 ATP23Q9Y6H3 246 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 SHANK1Q9Y566 2161 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 IGF2RP11717 2491 aa6.93□□□□□ -1.3
SMAD3-212ENST00000559937 CHD6Q8TD26 2715 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 LRP5LA4QPB2 252 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 NPIPB11E5RHQ5 1161 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 K7EPK0 472 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 GPR31O00270 319 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 AQP7O14520 342 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 MPPED1O15442 326 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 GPR137BO60478 399 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 SCO1O75880 301 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 NGFP01138 241 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 ACAA1P09110 424 aaPredicted RBP6.92□□□□□ -1.3
SMAD3-212ENST00000559937 FAM157CP0CG43 387 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF14P17017 642 aaPredicted RBP6.92□□□□□ -1.3
SMAD3-212ENST00000559937 IL32P24001 234 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 WNT5AP41221 380 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 P2RY1P47900 373 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 KCNJ3P48549 501 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 SULT1A2P50226 295 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 FXYD4P59646 89 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 GUSBP1Q15486 140 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 GABRA6Q16445 453 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 C3AR1Q16581 482 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 RNFT1Q5M7Z0 435 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 INO80CQ6PI98 192 aaPredicted RBP6.92□□□□□ -1.3
SMAD3-212ENST00000559937 P4HA3Q7Z4N8 544 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 MDP1Q86V88 176 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 FAM58AQ8N1B3 248 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms