RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 GSK3AP49840 483 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF660Q6AZW8 331 aaPredicted RBP9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 OR10D4PQ8NGN7 298 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 HPSE2Q8WWQ2 592 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 ISOC2Q96AB3 205 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 C2orf50Q96LR7 162 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 RAB1BQ9H0U4 201 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 RASL12Q9NYN1 266 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF106Q9H2Y7 1883 aaKnown RBP9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 PINLYPA6NC86 204 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 HBE1P02100 147 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 TLE4Q04727 773 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 GUCA2BQ16661 112 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 PHLDA2Q53GA4 152 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 AADACL3Q5VUY0 350 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 C20orf196Q8IYI0 205 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 FADS6Q8N9I5 356 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 OR13C8Q8NGS7 320 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 GAB2Q9UQC2 676 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 CACNA1DQ01668 2161 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 FANCMQ8IYD8 2048 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 KIF26AQ9ULI4 1882 aaPredicted RBP9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 KIR2DS1A0A191URI9 304 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 AQP7O14520 342 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 OGG1O15527 345 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 H2AFB1P0C5Y9 115 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 KIR2DS4P43632 304 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 RAB11AP62491 216 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 KIR2DS1Q14954 304 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 RIPPLY2Q5TAB7 128 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 TFAP2EQ6VUC0 442 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 PUSL1Q8N0Z8 303 aaKnown RBP9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 GPX7Q96SL4 187 aaPredicted RBP9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 PPP1R3CQ9UQK1 317 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 STARD10Q9Y365 291 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 SCN8AQ9UQD0 1980 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 SHISA3A0PJX4 238 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF205O95201 554 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF728P0DKX0 622 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 TMEM128Q5BJH2 165 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 DCAF12L2Q5VW00 463 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF705AQ6ZN79 300 aaPredicted RBP9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 OR52N4Q8NGI2 321 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 OR10AC1Q8NH08 325 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 CHST6Q9GZX3 395 aa9.29□□□□□ -0.92
CARMIL3-202ENST00000559694 MED13LQ71F56 2210 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 ST8SIA3O43173 380 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 SEMA7AO75326 666 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 SCAF4O95104 1147 aaKnown RBP9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 PTGFRP43088 359 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 GUK1Q16774 197 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 VWA1Q6PCB0 445 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 SLC25A47Q6Q0C1 308 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 SLC36A1Q7Z2H8 476 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 LRRC29Q8WV35 223 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 MS4A5Q9H3V2 200 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 GHRLQ9UBU3 117 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 USF3Q68DE3 2245 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 PIGBOS1A0A0B4J2F0 54 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 ZFP92A6NM28 416 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 OR4C45A6NMZ5 311 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 TMEM229AB2RXF0 380 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 CYB5BO43169 146 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 PHF1O43189 567 aaPredicted RBP9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 MMP16P51512 607 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 FAM27E3Q08E93 113 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 HES1Q14469 280 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 NCMAPQ5T1S8 102 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 RXFP4Q8TDU9 374 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 RBMXL1Q96E39 390 aaKnown RBP9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 SFXN3Q9BWM7 321 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 MPC1Q9Y5U8 109 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 TUSC2O75896 110 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF708P17019 499 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 RAB4BP61018 213 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 TLE1Q04724 770 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 HNF4GQ14541 408 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 MIDNQ504T8 468 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 UBALD1Q8TB05 177 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 FAM57AQ8TBR7 257 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 SNRNP40Q96DI7 357 aaKnown RBP9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 KCNK15Q9H427 330 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 ASCL3Q9NQ33 180 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 KLHDC2Q9Y2U9 406 aa9.28□□□□□ -0.92
CARMIL3-202ENST00000559694 A0A1W2PNV4 684 aa9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 A1L4Q6 167 aa9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 C9orf170A2RU37 121 aa9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 TERTO14746 1132 aaKnown RBP9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 DAOP14920 347 aa9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 DVL1P1P54792 670 aaPredicted RBP9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 CATR1Q13166 79 aa9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 C15orf54Q8N8G6 183 aa9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 UBAC2Q8NBM4 344 aa9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 OR5AP2Q8NGF4 316 aa9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 OR10J5Q8NHC4 309 aa9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 PLPPR2Q96GM1 343 aa9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 ZNF230Q9UIE0 474 aaPredicted RBP9.27□□□□□ -0.92
CARMIL3-202ENST00000559694 CDIPTO14735 213 aa9.27□□□□□ -0.93
CARMIL3-202ENST00000559694 NDUFB3O43676 98 aa9.27□□□□□ -0.93
CARMIL3-202ENST00000559694 LY86O95711 162 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms