RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CLPSL1A2RUU4 121 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 FAM172BPA6NC97 362 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 PTGES3LE9PB15 166 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 SLC33A1O00400 549 aaPredicted RBP6.66□□□□□ -1.34
SNX1-207ENST00000559401 CDRT1O95170 752 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 RBP4P02753 201 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 CELP19835 753 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 SERPINA2P20848 420 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 C21orf33P30042 268 aaPredicted RBP6.66□□□□□ -1.34
SNX1-207ENST00000559401 GLP1RP43220 463 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 GLIPR1P48060 266 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 DLX6P56179 175 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 RELBQ01201 579 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 YIF1BQ5BJH7 314 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 KRBOX4Q5JUW0 171 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 PRAMEF5Q5TYX0 476 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 DMKNQ6E0U4 476 aaPredicted RBP6.66□□□□□ -1.34
SNX1-207ENST00000559401 ASPHD2Q6ICH7 369 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 LAIR2Q6ISS4 152 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 BRICD5Q6PL45 260 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 CRIP3Q6Q6R5 217 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 TCF23Q7RTU1 214 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 LHFPL4Q7Z7J7 247 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 JAGN1Q8N5M9 183 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 CHST4Q8NCG5 386 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 PXT1Q8NFP0 134 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 NDNFQ8TB73 568 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 RPS4Y2Q8TD47 263 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 TFAP2CQ92754 450 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 MYDGFQ969H8 173 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 FOXRED1Q96CU9 486 aaPredicted RBP6.66□□□□□ -1.34
SNX1-207ENST00000559401 ZNF184Q99676 751 aaPredicted RBP6.66□□□□□ -1.34
SNX1-207ENST00000559401 CLEC7AQ9BXN2 247 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 METTL9Q9H1A3 318 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 TMEM133Q9H2Q1 129 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 VCX3BQ9H321 246 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 SEBOXQ9HB31 216 aaPredicted RBP6.66□□□□□ -1.34
SNX1-207ENST00000559401 PLCXD1Q9NUJ7 323 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 SCN3BQ9NY72 215 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 UBE2J1Q9Y385 318 aaPredicted RBP6.66□□□□□ -1.34
SNX1-207ENST00000559401 TBL2Q9Y4P3 447 aaKnown RBP6.66□□□□□ -1.34
SNX1-207ENST00000559401 RNF114Q9Y508 228 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 SESN1Q9Y6P5 492 aa6.66□□□□□ -1.34
SNX1-207ENST00000559401 TRBV5-5A0A0J9YX44 114 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 ODAMA1E959 279 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 F2RL2O00254 374 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 OR7C1O76099 320 aaPredicted RBP6.65□□□□□ -1.34
SNX1-207ENST00000559401 MAS1P04201 325 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 CDK2P24941 298 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 NFYBP25208 207 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 LMO1P25800 156 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 ERP29P30040 261 aaKnown RBP6.65□□□□□ -1.34
SNX1-207ENST00000559401 TGFBR2P37173 567 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 PTGFRP43088 359 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 SSX2Q16385 188 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 PIGYQ3MUY2 71 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 C6orf141Q5SZD1 244 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 ZNF626Q68DY1 528 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 OR52W1Q6IF63 320 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 ZNF529Q6P280 563 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 Q6P435 159 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 Q6ZSV7 163 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 OSR2Q8N2R0 312 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 OR4D6Q8NGJ1 314 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 OR4C13Q8NGP0 309 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 NEK7Q8TDX7 302 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 FBLIM1Q8WUP2 373 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 NRG4Q8WWG1 115 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 WFDC12Q8WWY7 111 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 MUL1Q969V5 352 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 PGLYRP3Q96LB9 341 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 MND1Q9BWT6 205 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 PPIL3Q9H2H8 161 aaKnown RBP6.65□□□□□ -1.34
SNX1-207ENST00000559401 RAB18Q9NP72 206 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 PAK1IP1Q9NWT1 392 aaPredicted RBP6.65□□□□□ -1.34
SNX1-207ENST00000559401 ST3GAL6Q9Y274 331 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 HILPDAQ9Y5L2 63 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 MMP24Q9Y5R2 645 aa6.65□□□□□ -1.34
SNX1-207ENST00000559401 KIAA2026Q5HYC2 2103 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 TRAV8-7A0A075B6U6 113 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 MEIKINA0A087WXM9 373 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 IGHV2-26A0A0B4J1V2 119 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 MAGEA13PA6NCF6 341 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 ODF3BA8MYP8 253 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 TOR1AO14656 332 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 MMP23AO75900 390 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 ALDOBP05062 364 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 CSN2P05814 226 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 CDK1P06493 297 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 FSTP19883 344 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 MAPK3P27361 379 aaPredicted RBP6.64□□□□□ -1.35
SNX1-207ENST00000559401 HTR1DP28221 377 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 RPS11P62280 158 aaKnown RBP eCLIP6.64□□□□□ -1.35
SNX1-207ENST00000559401 SRSF4Q08170 494 aaKnown RBP6.64□□□□□ -1.35
SNX1-207ENST00000559401 RBM39Q14498 530 aaKnown RBP6.64□□□□□ -1.35
SNX1-207ENST00000559401 IL13RA2Q14627 380 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 MED22Q15528 200 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 LTC4SQ16873 150 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 SLC22A6Q4U2R8 563 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 ARSJQ5FYB0 599 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms