RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 IZUMO2Q6UXV1 221 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 ZNF782Q6ZMW2 699 aaPredicted RBP3.58□□□□□ -1.84
SNX1-205ENST00000559339 C17orf107Q6ZR85 190 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 LINC00596Q86U02 117 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 LDLRAD3Q86YD5 345 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 CDH26Q8IXH8 852 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 LINC00528Q8N1L1 170 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 OSR2Q8N2R0 312 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 JAGN1Q8N5M9 183 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 Q8N7P7 452 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 NANOGP1Q8N7R0 232 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 NKAIN3Q8N8D7 197 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 ZFP41Q8N8Y5 198 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 BEND2Q8NDZ0 799 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 OR52N4Q8NGI2 321 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 OR4D6Q8NGJ1 314 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 OR51A2Q8NGJ7 313 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 OR4F5Q8NH21 305 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 OR5R1Q8NH85 324 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 RPS4Y2Q8TD47 263 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 UFD1Q92890 307 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 TNFRSF14Q92956 283 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 CREB3L1Q96BA8 519 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 FOXRED1Q96CU9 486 aaPredicted RBP3.58□□□□□ -1.84
SNX1-205ENST00000559339 MRPS24Q96EL2 167 aaKnown RBP3.58□□□□□ -1.84
SNX1-205ENST00000559339 PGLYRP3Q96LB9 341 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 OR14A2Q96R54 314 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 ZNF184Q99676 751 aaPredicted RBP3.58□□□□□ -1.84
SNX1-205ENST00000559339 SLITRK2Q9H156 845 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 BEX1Q9HBH7 125 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 RAB18Q9NP72 206 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 ABCB10Q9NRK6 738 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 OR6C3Q9NZP0 311 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 RAB26Q9ULW5 256 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 ING4Q9UNL4 249 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 FOXJ3Q9UPW0 622 aa3.58□□□□□ -1.84
SNX1-205ENST00000559339 UBE2J1Q9Y385 318 aaPredicted RBP3.58□□□□□ -1.84
SNX1-205ENST00000559339 MEIKINA0A087WXM9 373 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 TRBV5-5A0A0J9YX44 114 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 A0A1W2PPK0 400 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 A0A1W2PRD5 423 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 A0A1W2PRF3 423 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 A0A1W2PRM7 423 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 TMEM82A0PJX8 343 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 SLC33A1O00400 549 aaPredicted RBP3.57□□□□□ -1.84
SNX1-205ENST00000559339 GABRPO00591 440 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 TOR1AO14656 332 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 RGS10O43665 173 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 GPX5O75715 221 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 CLPXO76031 633 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 CDRT1O95170 752 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 ATP6V1G2O95670 118 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 LALBAP00709 142 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 IGHV1-8P0DP01 117 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 IGFBP3P17936 291 aaPredicted RBP3.57□□□□□ -1.84
SNX1-205ENST00000559339 GZMHP20718 246 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 SERPINA2P20848 420 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 MYF6P23409 242 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 COX7A1P24310 79 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 CFPP27918 469 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 CEACAM3P40198 252 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 VHLP40337 213 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 OR3A1P47881 315 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 OR3A4PP47883 348 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 KCNJ3P48549 501 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 PRRX1P54821 245 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 DLX1P56177 255 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 ZP1P60852 638 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 SLC35A2P78381 396 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 PRB3Q04118 309 aaPredicted RBP3.57□□□□□ -1.84
SNX1-205ENST00000559339 KLRD1Q13241 179 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 ZNF273Q14593 569 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 IL13RA2Q14627 380 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 ATXN7L3Q14CW9 347 aaPredicted RBP3.57□□□□□ -1.84
SNX1-205ENST00000559339 TRAM1Q15629 374 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 AANATQ16613 207 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 SLC22A6Q4U2R8 563 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 ACSM3Q53FZ2 586 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 PAN3Q58A45 887 aaKnown RBP3.57□□□□□ -1.84
SNX1-205ENST00000559339 AWAT1Q58HT5 328 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 RBM48Q5RL73 367 aaKnown RBP3.57□□□□□ -1.84
SNX1-205ENST00000559339 ATAD3CQ5T2N8 411 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 MINOS1Q5TGZ0 78 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 GLT8D1Q68CQ7 371 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 AWAT2Q6E213 333 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 DHRS7BQ6IAN0 325 aaPredicted RBP3.57□□□□□ -1.84
SNX1-205ENST00000559339 LAIR2Q6ISS4 152 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 SHISA2Q6UWI4 295 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 HEPN1Q6WQI6 88 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 PRSS48Q7RTY5 328 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 RTN4RL2Q86UN3 420 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 PNKDQ8N490 385 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 TPRX1Q8N7U7 411 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 ZNF485Q8NCK3 441 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 OR4S1Q8NGB4 309 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 OR11H6Q8NGC7 330 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 OR51T1Q8NGJ9 327 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 OR13C5Q8NGS8 318 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 SGMS2Q8NHU3 365 aa3.57□□□□□ -1.84
SNX1-205ENST00000559339 NDNFQ8TB73 568 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms