RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 GLIPR1P48060 266 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 AESQ08117 197 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 AWAT2Q6E213 333 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 ZNF782Q6ZMW2 699 aaPredicted RBP15.3■□□□□ 0.04
CASC4-209ENST00000559222 CMTM4Q8IZR5 234 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 OSR2Q8N2R0 312 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 SVOPQ8N4V2 548 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 TMEM104Q8NE00 496 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 ZNF418Q8TF45 676 aaPredicted RBP15.3■□□□□ 0.04
CASC4-209ENST00000559222 THRSPQ92748 146 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 DMRTB1Q96MA1 342 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 SUCNR1Q9BXA5 334 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 BANF2Q9H503 90 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 TCF7L1Q9HCS4 588 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 NDUFB11Q9NX14 153 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 GLS2Q9UI32 602 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 LRRC42Q9Y546 428 aa15.3■□□□□ 0.04
CASC4-209ENST00000559222 KIAA2026Q5HYC2 2103 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 ATRQ13535 2644 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 A0A0U1RQK1 487 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 MGST3O14880 152 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 GEMIN2O14893 280 aaKnown RBP15.29■□□□□ 0.04
CASC4-209ENST00000559222 SRMP19623 302 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 FPR2P25090 351 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 P2RX3P56373 397 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 IL13RA2Q14627 380 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 BAIAP2L2Q6UXY1 529 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 NKAIN3Q8N8D7 197 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 PLPPR1Q8TBJ4 325 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 C17orf50Q8WW18 174 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 PHYHIPQ92561 330 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 METTL8Q9H825 291 aaKnown RBP15.29■□□□□ 0.04
CASC4-209ENST00000559222 ST3GAL6Q9Y274 331 aa15.29■□□□□ 0.04
CASC4-209ENST00000559222 DNAJC9-AS1A6NH13 148 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 RNF212BA8MTL3 300 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 C17orf98A8MV24 154 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 MMP23AO75900 390 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 PRTN3P24158 256 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 CALRP27797 417 aaKnown RBP15.28■□□□□ 0.04
CASC4-209ENST00000559222 BMXP51813 675 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 SCGB2A2Q13296 93 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 KCTD21Q4G0X4 260 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 OR10K2Q6IF99 312 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 BRICD5Q6PL45 260 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 USP43Q70EL4 1123 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.28■□□□□ 0.04
CASC4-209ENST00000559222 OR5D13Q8NGL4 314 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 FAM46BQ96A09 425 aa15.28■□□□□ 0.04
CASC4-209ENST00000559222 UNKLQ9H9P5 680 aaKnown RBP15.28■□□□□ 0.04
CASC4-209ENST00000559222 AK6Q9Y3D8 172 aaKnown RBP15.28■□□□□ 0.04
CASC4-209ENST00000559222 CSTBP04080 98 aaKnown RBP15.27■□□□□ 0.04
CASC4-209ENST00000559222 COX7A1P24310 79 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 PAX6P26367 422 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 GDNFP39905 211 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 TRAM1Q15629 374 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 TAF9Q16594 264 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 PAN3Q58A45 887 aaKnown RBP15.27■□□□□ 0.04
CASC4-209ENST00000559222 NHLRC3Q5JS37 347 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 C1orf100Q5SVJ3 147 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 C1orf122Q6ZSJ8 110 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 CDH26Q8IXH8 852 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 SUMF2Q8NBJ7 301 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 CHST4Q8NCG5 386 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 TBC1D15Q8TC07 691 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 S100A13Q99584 98 aa15.27■□□□□ 0.04
CASC4-209ENST00000559222 TRAV39A0A0B4J263 110 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 NPFFO15130 113 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 OR7C1O76099 320 aaPredicted RBP15.26■□□□□ 0.03
CASC4-209ENST00000559222 CSN2P05814 226 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 ZNF728P0DKX0 622 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 CD37P11049 281 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 PSMA1P25786 263 aaKnown RBP15.26■□□□□ 0.03
CASC4-209ENST00000559222 ERP29P30040 261 aaKnown RBP15.26■□□□□ 0.03
CASC4-209ENST00000559222 SAA4P35542 130 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 UBA52P62987 128 aaKnown RBP15.26■□□□□ 0.03
CASC4-209ENST00000559222 MEF2CQ06413 473 aaPredicted RBP15.26■□□□□ 0.03
CASC4-209ENST00000559222 BLMHQ13867 455 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 NEDD8Q15843 81 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 KRBOX4Q5JUW0 171 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 UTF1Q5T230 341 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 CD200R1LQ6Q8B3 271 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 RTN4RL2Q86UN3 420 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 TAF15Q92804 592 aaKnown RBP eCLIP15.26■□□□□ 0.03
CASC4-209ENST00000559222 AJUBAQ96IF1 538 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 ZNF714Q96N38 554 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 UQCC2Q9BRT2 126 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 C19orf24Q9BVV8 132 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 LINC00312Q9Y6C7 94 aa15.26■□□□□ 0.03
CASC4-209ENST00000559222 A0A0A6YYJ9 748 aa15.25■□□□□ 0.03
CASC4-209ENST00000559222 hADV38S2A0JD32 116 aa15.25■□□□□ 0.03
CASC4-209ENST00000559222 ODAMA1E959 279 aa15.25■□□□□ 0.03
CASC4-209ENST00000559222 MEGF11A6BM72 1044 aa15.25■□□□□ 0.03
CASC4-209ENST00000559222 CCRL2O00421 344 aa15.25■□□□□ 0.03
CASC4-209ENST00000559222 CRTAPO75718 401 aaPredicted RBP15.25■□□□□ 0.03
CASC4-209ENST00000559222 GTF2F2P13984 249 aa15.25■□□□□ 0.03
CASC4-209ENST00000559222 MGMTP16455 207 aa15.25■□□□□ 0.03
CASC4-209ENST00000559222 OR10A3P58181 314 aa15.25■□□□□ 0.03
CASC4-209ENST00000559222 BAMBIQ13145 260 aa15.25■□□□□ 0.03
CASC4-209ENST00000559222 P2RY14Q15391 338 aa15.25■□□□□ 0.03
CASC4-209ENST00000559222 PRAMEF5Q5TYX0 476 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms