RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SUMF2Q8NBJ7 301 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 OR5H6Q8NGV6 325 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 C8orf46Q8TAG6 207 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 NDNFQ8TB73 568 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 RAB40AQ8WXH6 277 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 H1FXQ92522 213 aaKnown RBP8.97□□□□□ -0.97
TPM1-217ENST00000559108 FAM3DQ96BQ1 224 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 FOXRED1Q96CU9 486 aaPredicted RBP8.97□□□□□ -0.97
TPM1-217ENST00000559108 MED30Q96HR3 178 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 TBX15Q96SF7 602 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 NUDT16L1Q9BRJ7 211 aaKnown RBP8.97□□□□□ -0.97
TPM1-217ENST00000559108 SELENOIQ9C0D9 397 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 SIRPDQ9H106 197 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 RHOFQ9HBH0 211 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 RCC2Q9P258 522 aaKnown RBP8.97□□□□□ -0.97
TPM1-217ENST00000559108 OR5V1Q9UGF6 321 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 STEAP1Q9UHE8 339 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 HIVEP2P31629 2446 aa8.96□□□□□ -0.97
TPM1-217ENST00000559108 TRAV39A0A0B4J263 110 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 NOTOA8MTQ0 251 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 AIPO00170 330 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 DEGS1O15121 323 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 BPNT1O95861 308 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 PAHP00439 452 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 GTF2F2P13984 249 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 SNRPBP14678 240 aaKnown RBP8.96□□□□□ -0.98
TPM1-217ENST00000559108 CPT2P23786 658 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 GABRR1P24046 479 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 GDNFP39905 211 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 GLIPR1P48060 266 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 NPY4RP50391 375 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 CAPZA1P52907 286 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 AESQ08117 197 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 EDDM3AQ14507 147 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 SPCS2Q15005 226 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 GRK1Q15835 563 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 LRRC10Q5BKY1 277 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 TMEM200BQ69YZ2 307 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 HCP5Q6MZN7 132 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 FAHD2BQ6P2I3 314 aaPredicted RBP8.96□□□□□ -0.98
TPM1-217ENST00000559108 BAIAP2L2Q6UXY1 529 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 GDPGP1Q6ZNW5 385 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 LGALS14Q8TCE9 139 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 SLC25A38Q96DW6 304 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 FAHD2AQ96GK7 314 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 SNX22Q96L94 193 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 TM2D1Q9BX74 207 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 FAM234AQ9H0X4 552 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 RBM38Q9H0Z9 239 aaKnown RBP8.96□□□□□ -0.98
TPM1-217ENST00000559108 IFT22Q9H7X7 185 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 LIN7BQ9HAP6 207 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 ING3Q9NXR8 418 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 DAPK2Q9UIK4 370 aa8.96□□□□□ -0.98
TPM1-217ENST00000559108 ZFHX3Q15911 3703 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 IGHV3OR16-10A0A075B7F0 116 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 A0A0G2JMP0 313 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 A0A0X1KG70 313 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 PDCD5O14737 125 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 SH2D1BO14796 132 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 SOCS1O15524 211 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 MMP23AO75900 390 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 OR7C1O76099 320 aaPredicted RBP8.95□□□□□ -0.98
TPM1-217ENST00000559108 CSTBP04080 98 aaKnown RBP8.95□□□□□ -0.98
TPM1-217ENST00000559108 CHATP28329 748 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 RPL5P46777 297 aaKnown RBP8.95□□□□□ -0.98
TPM1-217ENST00000559108 ARF6P62330 175 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 PAN3Q58A45 887 aaKnown RBP8.95□□□□□ -0.98
TPM1-217ENST00000559108 PLAC9Q5JTB6 97 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 DCAF12L2Q5VW00 463 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 RSBN1Q5VWQ0 802 aaPredicted RBP8.95□□□□□ -0.98
TPM1-217ENST00000559108 OLFML2AQ68BL7 652 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 GPR141Q7Z602 305 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 TPRA1Q86W33 373 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 CLVS1Q8IUQ0 354 aaPredicted RBP8.95□□□□□ -0.98
TPM1-217ENST00000559108 FAM185AQ8N0U4 392 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 FAM89BQ8N5H3 189 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 OR4M2Q8NGB6 313 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 SULT4A1Q9BR01 284 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 DPCDQ9BVM2 203 aaPredicted RBP8.95□□□□□ -0.98
TPM1-217ENST00000559108 TMEM59Q9BXS4 323 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 GHRLQ9UBU3 117 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 FBLN5Q9UBX5 448 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 KCNS2Q9ULS6 477 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 CEPT1Q9Y6K0 416 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 MXRA5Q9NR99 2828 aa8.95□□□□□ -0.98
TPM1-217ENST00000559108 NF1P21359 2839 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 ENSAO43768 121 aaKnown RBP8.94□□□□□ -0.98
TPM1-217ENST00000559108 ZNF780AO75290 641 aaPredicted RBP8.94□□□□□ -0.98
TPM1-217ENST00000559108 UBBP0CG47 229 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 PPIAL4GP0DN37 164 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 CGB3P0DN86 165 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 CGB7P0DN87 165 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 IGHV4-38-2P0DP08 117 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 ARSBP15848 533 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 SERPINB10P48595 397 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 BMXP51813 675 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 P2RX3P56373 397 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 TMEM50BP56557 158 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 EDDM3BP56851 147 aa8.94□□□□□ -0.98
TPM1-217ENST00000559108 KLRD1Q13241 179 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms