RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 LIMS4P0CW20 117 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 CFHR2P36980 270 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 CAPGP40121 348 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 SOX2P48431 317 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 IL13RA1P78552 427 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 SLC25A26Q70HW3 274 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 C8orf59Q8N0T1 100 aaPredicted RBP7.96□□□□□ -1.13
SPG11-214ENST00000558989 PACRGLQ8N7B6 248 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 ZFP41Q8N8Y5 198 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 PNLDC1Q8NA58 520 aaKnown RBP7.96□□□□□ -1.13
SPG11-214ENST00000558989 SETD9Q8NE22 299 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 OR5D18Q8NGL1 313 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 OR5AK2Q8NH90 309 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 LHX4Q969G2 390 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 DACT3Q96B18 629 aaPredicted RBP7.96□□□□□ -1.13
SPG11-214ENST00000558989 MISP3Q96FF7 219 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 NKX3-1Q99801 234 aaPredicted RBP7.96□□□□□ -1.13
SPG11-214ENST00000558989 ZNF649Q9BS31 505 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 CHST5Q9GZS9 411 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 DCLRE1BQ9H816 532 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 KAAG1Q9UBP8 84 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 CLEC2DQ9UHP7 191 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 HHLA2Q9UM44 414 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 STAB1Q9NY15 2570 aa7.96□□□□□ -1.13
SPG11-214ENST00000558989 DNHD1Q96M86 4753 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 C5orf51A6NDU8 294 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 OR4C45A6NMZ5 311 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 FSHBP01225 129 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 PGA5P0DJD9 388 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 PPIAL4GP0DN37 164 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 PIPP12273 146 aaPredicted RBP7.96□□□□□ -1.14
SPG11-214ENST00000558989 AZGP1P25311 298 aaKnown RBP7.96□□□□□ -1.14
SPG11-214ENST00000558989 ATP5IP56385 69 aaPredicted RBP7.96□□□□□ -1.14
SPG11-214ENST00000558989 SLC34A1Q06495 639 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 SMIM21Q3B7S5 101 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 GPR157Q5UAW9 335 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 RBMS3Q6XE24 437 aaKnown RBP7.96□□□□□ -1.14
SPG11-214ENST00000558989 ZNF788Q6ZQV5 615 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 CD177Q8N6Q3 437 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 POC1AQ8NBT0 407 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 BPIFB6Q8NFQ5 453 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 OR4M1Q8NGD0 313 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 TAF15Q92804 592 aaKnown RBP eCLIP7.96□□□□□ -1.14
SPG11-214ENST00000558989 GGHQ92820 318 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 C12orf43Q96C57 262 aaKnown RBP7.96□□□□□ -1.14
SPG11-214ENST00000558989 ZNF48Q96MX3 618 aaPredicted RBP7.96□□□□□ -1.14
SPG11-214ENST00000558989 TBX15Q96SF7 602 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 SUCNR1Q9BXA5 334 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 VCXQ9H320 206 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 NEK6Q9HC98 313 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 ESM1Q9NQ30 184 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 IL36RNQ9UBH0 155 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 HSPB7Q9UBY9 170 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 RPUSD1Q9UJJ7 312 aaKnown RBP7.96□□□□□ -1.14
SPG11-214ENST00000558989 POLDIP2Q9Y2S7 368 aa7.96□□□□□ -1.14
SPG11-214ENST00000558989 IGKV1-9A0A0C4DH69 117 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 DHRS7CA6NNS2 312 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 H0YHG0 523 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 SIGLEC5O15389 551 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 ANGPTL7O43827 346 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 SCGB2A1O75556 95 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 ZFPL1O95159 310 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 ACAA1P09110 424 aaPredicted RBP7.95□□□□□ -1.14
SPG11-214ENST00000558989 ATF1P18846 271 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 MYL12AP19105 171 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 DUSP1P28562 367 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 TGM4P49221 684 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 FUT6P51993 359 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 ATP1B3P54709 279 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 AQP4P55087 323 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 MTCP1P56278 107 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 ACTG1P63261 375 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 KLRD1Q13241 179 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 AHSA2Q719I0 299 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 VMO1Q7Z5L0 202 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 SYS1Q8N2H4 156 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 ASCC1Q8N9N2 400 aaKnown RBP7.95□□□□□ -1.14
SPG11-214ENST00000558989 FBLIM1Q8WUP2 373 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 UPRTQ96BW1 309 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 ORAI1Q96D31 301 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 MED30Q96HR3 178 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 COMMD4Q9H0A8 199 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 FGF20Q9NP95 211 aaPredicted RBP7.95□□□□□ -1.14
SPG11-214ENST00000558989 INPP5EQ9NRR6 644 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 MTCH1Q9NZJ7 389 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 DHDHQ9UQ10 334 aa7.95□□□□□ -1.14
SPG11-214ENST00000558989 ELOA3CA0A087WX78 387 aaPredicted RBP7.94□□□□□ -1.14
SPG11-214ENST00000558989 HCKP08631 526 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 RPSAP08865 295 aaKnown RBP7.94□□□□□ -1.14
SPG11-214ENST00000558989 BCL3P20749 454 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 PRDX2P32119 198 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 NPBWR2P48146 333 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 RBP2P50120 134 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 HILS1P60008 231 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 ST3GAL4Q11206 333 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 BAMBIQ13145 260 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 TMPRSS11AQ6ZMR5 421 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 Q6ZSR3 168 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 PNKDQ8N490 385 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 OR5AN1Q8NGI8 311 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms