RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 GABRPO00591 440 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 DEGS1O15121 323 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 MAGEB3O15480 346 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 RPSAP08865 295 aaKnown RBP9.61□□□□□ -0.87
HERC1-202ENST00000558324 CSF1P09603 554 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 RAB3AP20336 220 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 CDK2P24941 298 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 ERP29P30040 261 aaKnown RBP9.61□□□□□ -0.87
HERC1-202ENST00000558324 GDNFP39905 211 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 HERPUD1Q15011 391 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 CDK5R1Q15078 307 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 ARSJQ5FYB0 599 aaPredicted RBP9.61□□□□□ -0.87
HERC1-202ENST00000558324 KRBOX4Q5JUW0 171 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 Q6P435 159 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 OR10K1Q8NGX5 313 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 TNFAIP8L1Q8WVP5 186 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 COQ2Q96H96 371 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 RDH12Q96NR8 316 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 OR5M11Q96RB7 305 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 JAM3Q9BX67 310 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 PPIL3Q9H2H8 161 aaKnown RBP9.61□□□□□ -0.87
HERC1-202ENST00000558324 ZNF702PQ9H963 129 aa9.61□□□□□ -0.87
HERC1-202ENST00000558324 FGF20Q9NP95 211 aaPredicted RBP9.61□□□□□ -0.87
HERC1-202ENST00000558324 CMYA5Q8N3K9 4069 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 FUOMA2VDF0 154 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 H0YJX3 145 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 CD2P06729 351 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 MYL12AP19105 171 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 CD24P25063 80 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 LMO1P25800 156 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 HTR1DP28221 377 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 PTGFRP43088 359 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 GLP1RP43220 463 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 MTNR1BP49286 362 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 RCN1Q15293 331 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 RSU1Q15404 277 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 PAN3Q58A45 887 aaKnown RBP9.6□□□□□ -0.87
HERC1-202ENST00000558324 MINOS1Q5TGZ0 78 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 RPL22L1Q6P5R6 122 aaKnown RBP9.6□□□□□ -0.87
HERC1-202ENST00000558324 TMPRSS11AQ6ZMR5 421 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 C1QL4Q86Z23 238 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 LYG1Q8N1E2 194 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 ABHD12Q8N2K0 398 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 CHST4Q8NCG5 386 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 OR4P4Q8NGL7 312 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 OR13C5Q8NGS8 318 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 GPR148Q8TDV2 347 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 ORAI1Q96D31 301 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 CPNE2Q96FN4 548 aaPredicted RBP9.6□□□□□ -0.87
HERC1-202ENST00000558324 RHOFQ9HBH0 211 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 CLEC2DQ9UHP7 191 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 PITPNC1Q9UKF7 332 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 SIRT4Q9Y6E7 314 aaPredicted RBP9.6□□□□□ -0.87
HERC1-202ENST00000558324 MINOS1-NBL1R4GNA1 71 aa9.6□□□□□ -0.87
HERC1-202ENST00000558324 IRGMA1A4Y4 181 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 ALX3O95076 343 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 HTR3BO95264 441 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 CSN2P05814 226 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 NFYBP25208 207 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 DCKP27707 260 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 OR3A4PP47883 348 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 PPP3R1P63098 170 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 RBM39Q14498 530 aaKnown RBP9.59□□□□□ -0.87
HERC1-202ENST00000558324 TMEM95Q3KNT9 176 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 PIGYQ3MUY2 71 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 UTF1Q5T230 341 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 OR52W1Q6IF63 320 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 C11orf88Q6PI97 169 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 HEPN1Q6WQI6 88 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 ZFP41Q8N8Y5 198 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 OR4D6Q8NGJ1 314 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 HAVCR2Q8TDQ0 301 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 TMEM106AQ96A25 262 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 CDCA4Q9BXL8 241 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 ZNF286AQ9HBT8 521 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 TAS2R3Q9NYW6 316 aa9.59□□□□□ -0.87
HERC1-202ENST00000558324 MEIKINA0A087WXM9 373 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 TRAV24A0A0B4J272 114 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 PNMA8CA0A1B0GUJ8 204 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 TOR1AO14656 332 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 PEX14O75381 377 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 CDRT1O95170 752 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 LALBAP00709 142 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 DYNLT3P51808 116 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 BLCAPP62952 87 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 LTC4SQ16873 150 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 C17orf58Q2M2W7 97 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 CCDC58Q4VC31 144 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 PDLIM3Q53GG5 364 aaPredicted RBP9.58□□□□□ -0.88
HERC1-202ENST00000558324 DDI2Q5TDH0 399 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 TTC23Q5W5X9 447 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 ZNF529Q6P280 563 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 Q6ZS46 218 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 RTN4RL2Q86UN3 420 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 DHRSXQ8N5I4 330 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 SETD9Q8NE22 299 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 PXT1Q8NFP0 134 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 ZNF596Q8TC21 504 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 CORO2AQ92828 525 aa9.58□□□□□ -0.88
HERC1-202ENST00000558324 SMIM19Q96E16 107 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms