RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 KMT5CQ86Y97 462 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 TTC3P53804 2025 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 VAMP5O95183 116 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 MMP9P14780 707 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 COL5A1-AS1Q5SY13 56 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 TUSC5Q8IXB3 177 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 SLC26A1Q9H2B4 701 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 HSPB8Q9UJY1 196 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 ECM29Q5VYK3 1845 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 M0R3E3 92 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 DHHO43323 396 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 PSG5Q15238 335 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 OR4P4Q8NGL7 312 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 PARD6GQ9BYG4 376 aaPredicted RBP12.37□□□□□ -0.43
SPG11-210ENST00000558319 PDFQ9HBH1 243 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 A0A087WUJ7 227 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 PLPP2O43688 288 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 PTGFRP43088 359 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 OR1F12Q8NHA8 337 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 DDX60Q8IY21 1712 aaKnown RBP12.37□□□□□ -0.43
SPG11-210ENST00000558319 OR2T8A6NH00 312 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 UBE2L3P68036 154 aaKnown RBP12.37□□□□□ -0.43
SPG11-210ENST00000558319 LIAT1Q6ZQX7 453 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 CARFQ8N187 725 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 SSMEM1Q8WWF3 244 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 TMEM56Q96MV1 263 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 SLC35B1P78383 322 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 PET117Q6UWS5 81 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 C16orf82Q7Z2V1 217 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 C1orf210Q8IVY1 113 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 FAHD2AQ96GK7 314 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 WDFY2Q96P53 400 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 BCL2L10Q9HD36 194 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 RNASE1P07998 156 aaKnown RBP12.36□□□□□ -0.43
SPG11-210ENST00000558319 VMA21Q3ZAQ7 101 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 TBC1D26Q86UD7 250 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 ADAD2Q8NCV1 583 aaKnown RBP12.36□□□□□ -0.43
SPG11-210ENST00000558319 K7ERU9 68 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 CDX4O14627 284 aaPredicted RBP12.36□□□□□ -0.43
SPG11-210ENST00000558319 PCMT1P22061 227 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 REG1BP48304 166 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 DLX1P56177 255 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 B4GALNT1Q00973 533 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 SPATA45Q537H7 98 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 WNT2BQ93097 391 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 RGPD1P0DJD0 1748 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 SCN11AQ9UI33 1791 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 LOC107984156A0A0G2JMH3 177 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 GAGE10A6NGK3 116 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 B4DEV8 164 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 C9orf172C9J069 976 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 ZNF628Q5EBL2 1059 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 ZNF793Q6ZN11 406 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 ARL17AQ8IVW1 177 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 SFTPA2Q8IWL1 248 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 SH2D2AQ9NP31 389 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 TMSB15BA0A087X1C1 80 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 PAGE4O60829 102 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 PNLIPP16233 465 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 RPS4Y1P22090 263 aaKnown RBP12.36□□□□□ -0.43
SPG11-210ENST00000558319 ANKRD37Q7Z713 158 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 PDPNQ86YL7 162 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 OR10D3Q8NH80 312 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 TM4SF19Q96DZ7 209 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 MANBALQ9NQG1 85 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 C4AP0C0L4 1744 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 CGB1A6NKQ9 187 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 CORTO00230 105 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 CHST1O43916 411 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 HERVK_113P61574 105 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 MRGPRX4Q96LA9 322 aa12.36□□□□□ -0.43
SPG11-210ENST00000558319 CDK2AP1O14519 115 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 MAGEA5P43359 124 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 UBE2V2Q15819 145 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 DGAT2L7PQ6IED9 249 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 ST8SIA1Q92185 356 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 MRPL13Q9BYD1 178 aaKnown RBP12.35□□□□□ -0.43
SPG11-210ENST00000558319 SRSF10O75494 262 aaKnown RBP12.35□□□□□ -0.43
SPG11-210ENST00000558319 ORM1P02763 201 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 NSUN5P2Q63ZY6 315 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 ZNF547Q8IVP9 402 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 CHODLQ9H9P2 273 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 P01737 135 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 HLA-GP17693 338 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 FKBP2P26885 142 aaKnown RBP12.35□□□□□ -0.43
SPG11-210ENST00000558319 PABPC1L2AQ5JQF8 200 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 ZNF32P17041 273 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 RCC1P18754 421 aaPredicted RBP12.35□□□□□ -0.43
SPG11-210ENST00000558319 TAS2R60P59551 318 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 PWWP2BQ6NUJ5 590 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 MOGAT1Q96PD6 335 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 OR2A5Q96R48 311 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 FGF2P09038 288 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 ID4P47928 161 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 EMP1P54849 157 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 PNRC1Q12796 327 aaPredicted RBP12.35□□□□□ -0.43
SPG11-210ENST00000558319 SKP2Q13309 424 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 TMEM255AQ5JRV8 349 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 PITPNC1Q9UKF7 332 aa12.35□□□□□ -0.43
SPG11-210ENST00000558319 PLAURQ03405 335 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms