RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 GAL3ST2Q9H3Q3 398 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 EXOSC4Q9NPD3 245 aaKnown RBP8.19□□□□□ -1.1
USP3-207ENST00000558218 SESN1Q9Y6P5 492 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 TRGV10A0A0A0MS01 117 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 IGKV1-12A0A0C4DH73 117 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 A0A0G2JK05 382 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 E9PI62 339 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 DEGS1O15121 323 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 OGG1O15527 345 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 INMTO95050 263 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 OR2H2O95918 312 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 IGKV1D-12P01611 117 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 HCKP08631 526 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 TMEM225BP0DP42 221 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 PIPP12273 146 aaPredicted RBP8.18□□□□□ -1.1
USP3-207ENST00000558218 RAB3AP20336 220 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 RAB6AP20340 208 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 COX7A1P24310 79 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 OR3A1P47881 315 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 ZP1P60852 638 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 PAX5Q02548 391 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 ZNF691Q5VV52 312 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 ASPHD2Q6ICH7 369 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 HEPN1Q6WQI6 88 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 ASCL4Q6XD76 172 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 OR2T6Q8NHC8 308 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 RPS4Y2Q8TD47 263 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 PDCD1LG2Q9BQ51 273 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 CLEC7AQ9BXN2 247 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 KRTAP9-2Q9BYQ4 174 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 TMEM133Q9H2Q1 129 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 TCF7L1Q9HCS4 588 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 PCDHB16Q9NRJ7 776 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 CHCHD3Q9NX63 227 aaKnown RBP8.18□□□□□ -1.1
USP3-207ENST00000558218 BABAM2Q9NXR7 383 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 DIMT1Q9UNQ2 313 aaKnown RBP8.18□□□□□ -1.1
USP3-207ENST00000558218 GSTK1Q9Y2Q3 226 aa8.18□□□□□ -1.1
USP3-207ENST00000558218 IGHV2-26A0A0B4J1V2 119 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 MYL12AP19105 171 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 HTR1DP28221 377 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 DUSP1P28562 367 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 KCNJ3P48549 501 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 EFNB2P52799 333 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 KRTAP10-3P60369 221 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 SRSF4Q08170 494 aaKnown RBP8.17□□□□□ -1.1
USP3-207ENST00000558218 EDDM3AQ14507 147 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 SSX2Q16385 188 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 Q6P435 159 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 ZNF782Q6ZMW2 699 aaPredicted RBP8.17□□□□□ -1.1
USP3-207ENST00000558218 TCF23Q7RTU1 214 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 Q8N2B8 174 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 DHRSXQ8N5I4 330 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 ZNF565Q8N9K5 539 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 OR51T1Q8NGJ9 327 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 ZNF596Q8TC21 504 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 TSEN15Q8WW01 171 aaKnown RBP8.17□□□□□ -1.1
USP3-207ENST00000558218 TMEM80Q96HE8 168 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 BARHL1Q9BZE3 327 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 TMEM138Q9NPI0 162 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 ABCB10Q9NRK6 738 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 OR6C3Q9NZP0 311 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 IL36RNQ9UBH0 155 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 TCF19Q9Y242 345 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 ZNF281Q9Y2X9 895 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 EXOSC1Q9Y3B2 195 aaKnown RBP8.17□□□□□ -1.1
USP3-207ENST00000558218 KIAA2026Q5HYC2 2103 aa8.17□□□□□ -1.1
USP3-207ENST00000558218 A0A087X0M5 115 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 A0A1B0GX30 115 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 ODAMA1E959 279 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 A6NDX4 124 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 ZNF729A6NN14 1252 aaPredicted RBP8.16□□□□□ -1.1
USP3-207ENST00000558218 FAM90A22PA8MWA6 464 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 SIRPB1O00241 398 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 SLC33A1O00400 549 aaPredicted RBP8.16□□□□□ -1.1
USP3-207ENST00000558218 ZNF780AO75290 641 aaPredicted RBP8.16□□□□□ -1.1
USP3-207ENST00000558218 GPX5O75715 221 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 ZNF44P15621 663 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 CD34P28906 385 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 ETV1P50549 477 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 ARHGDIBP52566 201 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 GTF2A1P52655 376 aaPredicted RBP8.16□□□□□ -1.1
USP3-207ENST00000558218 PRRX1P54821 245 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 ADARB1P78563 741 aaKnown RBP8.16□□□□□ -1.1
USP3-207ENST00000558218 BDH1Q02338 343 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 DYNC1I2Q13409 638 aaKnown RBP8.16□□□□□ -1.1
USP3-207ENST00000558218 IL13RA2Q14627 380 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 HERPUD1Q15011 391 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 CDK5R1Q15078 307 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 LY6EQ16553 131 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 SMN1Q16637 294 aaKnown RBP8.16□□□□□ -1.1
USP3-207ENST00000558218 KRBOX4Q5JUW0 171 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 SLC16A12Q6ZSM3 486 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 Q6ZTK2 550 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 LHFPL4Q7Z7J7 247 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 TRAPPC6BQ86SZ2 158 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 ABHD12Q8N2K0 398 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 OR5D18Q8NGL1 313 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 OR52N1Q8NH53 320 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 RFT1Q96AA3 541 aa8.16□□□□□ -1.1
USP3-207ENST00000558218 SMIM19Q96E16 107 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms