RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 POU2F2P09086 479 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 ARF6P62330 175 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 CLEC1BQ9P126 229 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 ZNF774Q6NX45 483 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 INSL6Q9Y581 213 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 K7ESM1 405 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 COX5BP10606 129 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 PNLIPP16233 465 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 GAS1P54826 345 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 ZNF718Q3SXZ3 478 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 TMEM164Q5U3C3 297 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 PLXDC1Q8IUK5 500 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 GBGT1Q8N5D6 347 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 OR13G1Q8NGZ3 307 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 FLRT3Q9NZU0 649 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 MBLAC1A4D2B0 266 aaPredicted RBP3.26□□□□□ -1.89
ATXN3-248ENST00000558190 CRYM-AS1A6NIL9 109 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 DLEU1O43261 78 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 NRTNQ99748 197 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 CISD1Q9NZ45 108 aaKnown RBP3.26□□□□□ -1.89
ATXN3-248ENST00000558190 GDE1Q9NZC3 331 aa3.26□□□□□ -1.89
ATXN3-248ENST00000558190 C4orf47A7E2U8 309 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 HIST1H1EP10412 219 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 SERF2P84101 59 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 EDDM3AQ14507 147 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 COX19Q49B96 90 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 CLDN23Q96B33 292 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 OR2A5Q96R48 311 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 OR6C1Q96RD1 312 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 CDCA3Q99618 268 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 ZFAND6Q6FIF0 208 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 GRAMD2BQ96HH9 432 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 CRISPLD2Q9H0B8 497 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 GZMBP10144 247 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 DUSP2Q05923 314 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 PQLC2Q6ZP29 291 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 SSMEM1Q8WWF3 244 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 IGSF23A1L1A6 192 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 SERTM1A2A2V5 107 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 ZNF708P17019 499 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 NKAIN3Q8N8D7 197 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 UBTD1Q9HAC8 227 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 A0A1W2PNR3 127 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 OR8B3Q8NGG8 313 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 GLRX2Q9NS18 164 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 F11RQ9Y624 299 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 GAGE12BA1L429 117 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 FKBP1BP68106 108 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 TMEM108Q6UXF1 575 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 TMEM183AQ8IXX5 376 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 FGFRL1Q8N441 504 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 HCFC1R1Q9NWW0 138 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 HILPDAQ9Y5L2 63 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 A0A1B0GV72 72 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 MRGPRX4Q96LA9 322 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 PLA2G3Q9NZ20 509 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 APOBEC3BQ9UH17 382 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 OR4C46A6NHA9 309 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 PRAMEF4O60810 478 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 CXorf1O96002 111 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 GAPDHP04406 335 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 SLC25A5P05141 298 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 SPINK8P0C7L1 97 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 SLC38A11Q08AI6 406 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 HIST3H2BBQ8N257 126 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 ANXA10Q9UJ72 324 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 A0A0G2JLL6 359 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 PRAMEF26H0Y7S4 382 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 SYNGR2O43760 224 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 KBTBD11O94819 623 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 RHOBP62745 196 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 PRRT2Q7Z6L0 340 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 STXBP6Q8NFX7 210 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 PTRH2Q9Y3E5 179 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 CRYBB3P26998 211 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 C1orf100Q5SVJ3 147 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 MORN4Q8NDC4 146 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 ZCCHC14Q8WYQ9 949 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 SPACA9Q96E40 222 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 C4orf45Q96LM5 186 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 G6PC2Q9NQR9 355 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 SF3B6Q9Y3B4 125 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 ARHGEF17Q96PE2 2063 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 SLC6A18Q96N87 628 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 TMEM147Q9BVK8 224 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 YIPF1Q9Y548 306 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 HOXA6P31267 233 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 RPS15P62841 145 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 RAC1P63000 192 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 MYBPHQ13203 477 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 SMOC1Q9H4F8 434 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 RAB9BQ9NP90 201 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 GPR27Q9NS67 375 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 TMEM160Q9NX00 188 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 A0A1W2PPE3 182 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 COX7A2P2O60397 106 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 CNN3Q15417 329 aaKnown RBP3.25□□□□□ -1.89
ATXN3-248ENST00000558190 TWIST1Q15672 202 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 SMIM8Q96KF7 97 aa3.25□□□□□ -1.89
ATXN3-248ENST00000558190 IMMP2LQ96T52 175 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms