RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 GPR12P47775 334 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 PSMD7P51665 324 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 FUT6P51993 359 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 RIDAP52758 137 aaKnown RBP4.04□□□□□ -1.76
SPG11-208ENST00000558155 PSME3P61289 254 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 RPS7P62081 194 aaKnown RBP4.04□□□□□ -1.76
SPG11-208ENST00000558155 ZNF616Q08AN1 781 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 FHL3Q13643 280 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 ZNF146Q15072 292 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 ZNF829Q3KNS6 432 aaPredicted RBP4.04□□□□□ -1.76
SPG11-208ENST00000558155 SLC35D3Q5M8T2 416 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 C8orf82Q6P1X6 216 aaPredicted RBP4.04□□□□□ -1.76
SPG11-208ENST00000558155 TMEM65Q6PI78 240 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 BAIAP2L2Q6UXY1 529 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 LHFPL2Q6ZUX7 228 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 SLC25A26Q70HW3 274 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 TGIF2LXQ8IUE1 241 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 SGPP2Q8IWX5 399 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 ZNF679Q8IYX0 411 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 OR8H3Q8N146 312 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 FAM58AQ8N1B3 248 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 FAM71E2Q8N5Q1 922 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 RNF148Q8N7C7 305 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 ZNF565Q8N9K5 539 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 AQP11Q8NBQ7 271 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 OR9Q2Q8NGE9 314 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 OR14K1Q8NGZ2 314 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 OR56B4Q8NH76 319 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 TEX47Q8TBZ9 253 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 HAVCR2Q8TDQ0 301 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 ASB17Q8WXJ9 295 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 ST6GALNAC6Q969X2 333 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 SLAMF9Q96A28 289 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 UBE2E2Q96LR5 201 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 RASL11BQ9BPW5 248 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 SPATA25Q9BR10 227 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 CHCHD6Q9BRQ6 235 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 BTBD10Q9BSF8 475 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 DGCR6LQ9BY27 220 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 CADM1Q9BY67 442 aaKnown RBP4.04□□□□□ -1.76
SPG11-208ENST00000558155 YIPF3Q9GZM5 350 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 ABCG5Q9H222 651 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 VCX3BQ9H321 246 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 ZNF286AQ9HBT8 521 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 ARMC1Q9NVT9 282 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 ABCD2Q9UBJ2 740 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 NUFIP1Q9UHK0 495 aaKnown RBP4.04□□□□□ -1.76
SPG11-208ENST00000558155 TMEM14AQ9Y6G1 99 aa4.04□□□□□ -1.76
SPG11-208ENST00000558155 EPPK1P58107 5090 aaKnown RBP4.03□□□□□ -1.76
SPG11-208ENST00000558155 A6NIN4 97 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 ZNF729A6NN14 1252 aaPredicted RBP4.03□□□□□ -1.76
SPG11-208ENST00000558155 DHRS7CA6NNS2 312 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 A8MZ25 164 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 LOC110117498-PIK3R3F6TDL0 507 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 H3BN98 237 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 H3BSH0 61 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 SIRPB1O00241 398 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 PRODHO43272 600 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 CCDC22O60826 627 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 SAP30O75446 220 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 SOX14O95416 240 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 BPNT1O95861 308 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 IGHG4P01861 327 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 TTRP02766 147 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 GAPDHP04406 335 aaKnown RBP4.03□□□□□ -1.76
SPG11-208ENST00000558155 DUSP1P28562 367 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 GDNFP39905 211 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 PTGFRP43088 359 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 GLIPR1P48060 266 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 HCCSP53701 268 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 ATP1B3P54709 279 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 ISL1P61371 349 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 RUNX1Q01196 453 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 ZNF91Q05481 1191 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 AESQ08117 197 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 BNIP1Q12981 228 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 MADCAM1Q13477 382 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 EBI3Q14213 229 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 SRSF7Q16629 238 aaKnown RBP eCLIP4.03□□□□□ -1.76
SPG11-208ENST00000558155 MICAQ29983 383 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 SPIN3Q5JUX0 258 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 C16orf89Q6UX73 402 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 SLC16A12Q6ZSM3 486 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 SATL1Q86VE3 508 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 CPOQ8IVL8 374 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 ELMOD2Q8IZ81 293 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 OR2T10Q8NGZ9 312 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 SUN5Q8TC36 379 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 DCUN1D4Q92564 292 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 EME1Q96AY2 570 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 BORCS8Q96FH0 119 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 EAF1Q96JC9 268 aaPredicted RBP4.03□□□□□ -1.76
SPG11-208ENST00000558155 NSMCE2Q96MF7 247 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 OR4C12Q96R67 309 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 ADI1Q9BV57 179 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 EXOSC4Q9NPD3 245 aaKnown RBP4.03□□□□□ -1.76
SPG11-208ENST00000558155 SPAG4Q9NPE6 437 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 ISYNA1Q9NPH2 558 aa4.03□□□□□ -1.76
SPG11-208ENST00000558155 LIN7CQ9NUP9 197 aaKnown RBP4.03□□□□□ -1.76
SPG11-208ENST00000558155 C19orf73Q9NVV2 129 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms