RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 A0A0A6YYH2 397 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 IGHV2-70DA0A0C4DH43 119 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 KIR2DS1A0A191URI9 304 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 A6NJ64 397 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 SLC33A1O00400 549 aaPredicted RBP11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 GEMIN2O14893 280 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 TGFAP01135 160 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 NDUFB7P17568 137 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 FUT3P21217 361 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 GABRR1P24046 479 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 RPS19P39019 145 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 RORCP51449 518 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 LSM3P62310 102 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 HOXA4Q00056 320 aaPredicted RBP11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 MXD1Q05195 221 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 UNC119Q13432 240 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 P2RY14Q15391 338 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 PIGYQ3MUY2 71 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 PAN3Q58A45 887 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 RAB12Q6IQ22 244 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 C17orf107Q6ZR85 190 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 C1orf122Q6ZSJ8 110 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 KIR3DL3Q8N743 410 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 LY6G5BQ8NDX9 201 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 ST8SIA4Q92187 359 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 DACT3Q96B18 629 aaPredicted RBP11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 NEDD4LQ96PU5 975 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 BARHL1Q9BZE3 327 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 SHARPINQ9H0F6 387 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 RNF167Q9H6Y7 350 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 DAPK2Q9UIK4 370 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 RPUSD1Q9UJJ7 312 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 KCNS2Q9ULS6 477 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 HSF4Q9ULV5 492 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 SPATA2Q9UM82 520 aa11.7□□□□□ -0.54
SUPT16H-208ENST00000557652 SONP18583 2426 aaKnown RBP11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 hCG_1809904A0A1W2PP81 198 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 A0A1W2PPE2 198 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 A0A1W2PR64 198 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 A0A1W2PRV1 198 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 MCRIP1C9JLW8 97 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 PDCD6O75340 191 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 RBP4P02753 201 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 DUSP1P28562 367 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 SOX6P35712 828 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 OR3A1P47881 315 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 SEC61A1P61619 476 aaKnown RBP11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 PAX2Q02962 417 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 HNRNPA0Q13151 305 aaKnown RBP11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 GRK1Q15835 563 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 TAF9Q16594 264 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 DCAF12L2Q5VW00 463 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 BTN2A1Q7KYR7 527 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 CMTM4Q8IZR5 234 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 BATF2Q8N1L9 274 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 MAPK1IP1LQ8NDC0 245 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 ISOC1Q96CN7 298 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 NKX3-1Q99801 234 aaPredicted RBP11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 DPCDQ9BVM2 203 aaPredicted RBP11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 LPAR5Q9H1C0 372 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 RIMS4Q9H426 269 aaPredicted RBP11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 BANF2Q9H503 90 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 RAB9BQ9NP90 201 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 HIF1ANQ9NWT6 349 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 IL36RNQ9UBH0 155 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 INSIG2Q9Y5U4 225 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 KPTNQ9Y664 436 aa11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 ZNF469Q96JG9 3925 aaPredicted RBP11.69□□□□□ -0.54
SUPT16H-208ENST00000557652 TRAV24A0A0B4J272 114 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 TMEM272A0A1B0GTI8 110 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 A0A1W2PP11 408 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 hADV38S2A0JD32 116 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 TMEM82A0PJX8 343 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 M0R1W7 72 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 SIRPB1O00241 398 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 PHF1O43189 567 aaPredicted RBP11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 PSPNO60542 156 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 ZFP36P26651 326 aaKnown RBP11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 RBMXP38159 391 aaKnown RBP11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 CEBPDP49716 269 aaPredicted RBP11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 SNU13P55769 128 aaKnown RBP11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 P2RX3P56373 397 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 CLDN12P56749 244 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 RPL31P62899 125 aaKnown RBP11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 LCN2P80188 198 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 KRTAP1-1Q07627 177 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 IDNKQ5T6J7 187 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 MZT2AQ6P582 158 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 SUMF2Q8NBJ7 301 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 FAM46BQ96A09 425 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 NAA50Q9GZZ1 169 aaKnown RBP11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 OR6C3Q9NZP0 311 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 LINC00312Q9Y6C7 94 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 CEPT1Q9Y6K0 416 aa11.68□□□□□ -0.54
SUPT16H-208ENST00000557652 MTORP42345 2549 aa11.67□□□□□ -0.54
SUPT16H-208ENST00000557652 A8MV72 311 aaPredicted RBP11.67□□□□□ -0.54
SUPT16H-208ENST00000557652 CLEC2LP0C7M8 214 aa11.67□□□□□ -0.54
SUPT16H-208ENST00000557652 ZNF16P17020 682 aaPredicted RBP11.67□□□□□ -0.54
SUPT16H-208ENST00000557652 ZNF182P17025 639 aaPredicted RBP11.67□□□□□ -0.54
SUPT16H-208ENST00000557652 CHATP28329 748 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms