RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 KRBOX4Q5JUW0 171 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 LDLRAD2Q5SZI1 272 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 DDI2Q5TDH0 399 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 ZNF626Q68DY1 528 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 SLC35E4Q6ICL7 350 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 Q6P435 159 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 AHSA2Q719I0 299 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 TMEM219Q86XT9 240 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 STX19Q8N4C7 294 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 BPIFB6Q8NFQ5 453 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 GHSRQ92847 366 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 CPNE2Q96FN4 548 aaPredicted RBP13.4□□□□□ -0.26
VSX1-207ENST00000557285 TMEM133Q9H2Q1 129 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 TCF7L1Q9HCS4 588 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 ABCB10Q9NRK6 738 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 ING4Q9UNL4 249 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 ZNF281Q9Y2X9 895 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 UBE2J1Q9Y385 318 aaPredicted RBP13.4□□□□□ -0.26
VSX1-207ENST00000557285 IGHV2-26A0A0B4J1V2 119 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 FUOMA2VDF0 154 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 EFCAB10A6NFE3 127 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 OGG1O15527 345 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 CHST1O43916 411 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 CDRT1O95170 752 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 HTR3BO95264 441 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 CDK2P24941 298 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 MTNR1BP49286 362 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 PROK1P58294 105 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 PAN3Q58A45 887 aaKnown RBP13.39□□□□□ -0.27
VSX1-207ENST00000557285 LAIR2Q6ISS4 152 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 ZNF529Q6P280 563 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 TREML4Q6UXN2 200 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 OR4C13Q8NGP0 309 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 OR52N1Q8NH53 320 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 RPS4Y2Q8TD47 263 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 FOXRED1Q96CU9 486 aaPredicted RBP13.39□□□□□ -0.27
VSX1-207ENST00000557285 CITED1Q99966 193 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 CLEC7AQ9BXN2 247 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 PPIL3Q9H2H8 161 aaKnown RBP13.39□□□□□ -0.27
VSX1-207ENST00000557285 VCXQ9H320 206 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 GAL3ST2Q9H3Q3 398 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 C16orf95Q9H693 158 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 RHOFQ9HBH0 211 aa13.39□□□□□ -0.27
VSX1-207ENST00000557285 NKX1-2Q9UD57 310 aaPredicted RBP13.39□□□□□ -0.27
VSX1-207ENST00000557285 TBL2Q9Y4P3 447 aaKnown RBP13.39□□□□□ -0.27
VSX1-207ENST00000557285 A0A1W2PPK0 400 aa13.38□□□□□ -0.27
VSX1-207ENST00000557285 ODAMA1E959 279 aa13.38□□□□□ -0.27
VSX1-207ENST00000557285 FAM90A8PA6NJQ4 464 aa13.38□□□□□ -0.27
VSX1-207ENST00000557285 CASQ2O14958 399 aaPredicted RBP13.38□□□□□ -0.27
VSX1-207ENST00000557285 ERP29P30040 261 aaKnown RBP13.38□□□□□ -0.27
VSX1-207ENST00000557285 ZNF93P35789 620 aaPredicted RBP13.38□□□□□ -0.27
VSX1-207ENST00000557285 SLC34A1Q06495 639 aa13.38□□□□□ -0.27
VSX1-207ENST00000557285 HIST2H2BDQ6DRA6 164 aa13.38□□□□□ -0.27
VSX1-207ENST00000557285 DMKNQ6E0U4 476 aaPredicted RBP13.38□□□□□ -0.27
VSX1-207ENST00000557285 CHST4Q8NCG5 386 aa13.38□□□□□ -0.27
VSX1-207ENST00000557285 OR11H6Q8NGC7 330 aa13.38□□□□□ -0.27
VSX1-207ENST00000557285 PIFOQ8TCI5 191 aa13.38□□□□□ -0.27
VSX1-207ENST00000557285 COQ2Q96H96 371 aa13.38□□□□□ -0.27
VSX1-207ENST00000557285 TMEM138Q9NPI0 162 aa13.38□□□□□ -0.27
VSX1-207ENST00000557285 HSPE1-MOB4S4R3N1 261 aa13.38□□□□□ -0.27
VSX1-207ENST00000557285 F2RL2O00254 374 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 MYL12BO14950 172 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 TSPAN9O75954 239 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 SERPINA2P20848 420 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 NFYBP25208 207 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 LMO1P25800 156 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 C21orf33P30042 268 aaPredicted RBP13.37□□□□□ -0.27
VSX1-207ENST00000557285 BDKRB2P30411 391 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 GDNFP39905 211 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 PTGFRP43088 359 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 GLP1RP43220 463 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 RIPK1Q13546 671 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 AANATQ16613 207 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 ABHD12Q8N2K0 398 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 PXT1Q8NFP0 134 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 MALSU1Q96EH3 234 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 OR14A2Q96R54 314 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 S100A13Q99584 98 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 RAB18Q9NP72 206 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 ZNF581Q9P0T4 197 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 CKLFQ9UBR5 152 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 PSORS1C1Q9UIG5 152 aa13.37□□□□□ -0.27
VSX1-207ENST00000557285 CMYA5Q8N3K9 4069 aa13.36□□□□□ -0.27
VSX1-207ENST00000557285 TRAV8-7A0A075B6U6 113 aa13.36□□□□□ -0.27
VSX1-207ENST00000557285 TRAV24A0A0B4J272 114 aa13.36□□□□□ -0.27
VSX1-207ENST00000557285 MAGEA13PA6NCF6 341 aa13.36□□□□□ -0.27
VSX1-207ENST00000557285 RBM39Q14498 530 aaKnown RBP13.36□□□□□ -0.27
VSX1-207ENST00000557285 LTC4SQ16873 150 aa13.36□□□□□ -0.27
VSX1-207ENST00000557285 ELP2Q6IA86 826 aa13.36□□□□□ -0.27
VSX1-207ENST00000557285 C11orf44Q8N8P7 122 aa13.36□□□□□ -0.27
VSX1-207ENST00000557285 OR4D6Q8NGJ1 314 aa13.36□□□□□ -0.27
VSX1-207ENST00000557285 ZNF184Q99676 751 aaPredicted RBP13.36□□□□□ -0.27
VSX1-207ENST00000557285 NPFFR1Q9GZQ6 430 aa13.36□□□□□ -0.27
VSX1-207ENST00000557285 METTL9Q9H1A3 318 aa13.36□□□□□ -0.27
VSX1-207ENST00000557285 DCLRE1BQ9H816 532 aa13.36□□□□□ -0.27
VSX1-207ENST00000557285 CNOT2Q9NZN8 540 aaKnown RBP13.36□□□□□ -0.27
VSX1-207ENST00000557285 KIF25Q9UIL4 384 aa13.36□□□□□ -0.27
VSX1-207ENST00000557285 MEIKINA0A087WXM9 373 aa13.35□□□□□ -0.27
VSX1-207ENST00000557285 TRAV39A0A0B4J263 110 aa13.35□□□□□ -0.27
VSX1-207ENST00000557285 TRBV5-5A0A0J9YX44 114 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms