RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TRDCB7Z8K6 153 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 HSD17B6O14756 317 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 BCAT2O15382 392 aaPredicted RBP9.83□□□□□ -0.84
SRP54-213ENST00000556994 ADAM20O43506 726 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 TCN2P20062 427 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 DYNLT3P51808 116 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 RAB2AP61019 212 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 CCL7P80098 99 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 DLK1P80370 383 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 ZNF92Q03936 586 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 HIKESHIQ53FT3 197 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 PDZD11Q5EBL8 140 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 PYY3Q5JQD4 70 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 PLCXD3Q63HM9 321 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 LHFPL2Q6ZUX7 228 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 TBC1D26Q86UD7 250 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 ZNF695Q8IW36 515 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 TMEM252Q8N6L7 170 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 CYB561D1Q8N8Q1 229 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 CCDC71LQ8N9Z2 235 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 OR1F12Q8NHA8 337 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 Q8WTZ3 238 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 C11orf1Q9H5F2 150 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 DKKL1Q9UK85 242 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 TGIF2-C20orf24A0A0A6YYL0 155 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 HSPB6O14558 160 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 PDCD6O75340 191 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 NDUFS6O75380 124 aaKnown RBP9.83□□□□□ -0.84
SRP54-213ENST00000556994 TMEM50AO95807 157 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 SRP19P09132 144 aaKnown RBP9.83□□□□□ -0.84
SRP54-213ENST00000556994 JMJD7P0C870 316 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 HOXA5P20719 270 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 ERVFRD-1P60508 538 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 MRPS34P82930 218 aaKnown RBP9.83□□□□□ -0.84
SRP54-213ENST00000556994 RAB35Q15286 201 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 ELOBQ15370 118 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 OR2B11Q5JQS5 317 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 SPNS3Q6ZMD2 512 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 ZNF429Q86V71 674 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 ODF3L1Q8IXM7 274 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 PAPOLGQ9BWT3 736 aaKnown RBP9.83□□□□□ -0.84
SRP54-213ENST00000556994 TMEM222Q9H0R3 208 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 PROK2Q9HC23 129 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 OCIAD1Q9NX40 245 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 DOK5Q9P104 306 aa9.83□□□□□ -0.84
SRP54-213ENST00000556994 IGHV5-10-1A0A0J9YXX1 117 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 ZNF587BE7ETH6 402 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 TNFSF12O43508 249 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 VAMP5O95183 116 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 SPINK2P20155 84 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 FKBP2P26885 142 aaKnown RBP9.82□□□□□ -0.84
SRP54-213ENST00000556994 MAS1LP35410 378 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 VAMP2P63027 116 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 ZNF266Q14584 549 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 DAZAP2Q15038 168 aaPredicted RBP9.82□□□□□ -0.84
SRP54-213ENST00000556994 ASCL4Q6XD76 172 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 ZNF818PQ6ZRF7 136 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 C1QL4Q86Z23 238 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 HS3ST6Q96QI5 342 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 PLEKHF2Q9H8W4 249 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 FSCN3Q9NQT6 498 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 PARPBPQ9NWS1 579 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 C19orf25Q9UFG5 118 aaPredicted RBP9.82□□□□□ -0.84
SRP54-213ENST00000556994 ZNF407Q9C0G0 2248 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 A0A1B0GW64 132 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 SCTP09683 121 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 LIFP15018 202 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 UCP3P55916 312 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 RBM11P57052 281 aaKnown RBP9.82□□□□□ -0.84
SRP54-213ENST00000556994 PSG4Q00888 419 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 ZNF154Q13106 437 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 ICAM4Q14773 271 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 PCOLCEQ15113 449 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 GFI1BQ5VTD9 330 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 SLC25A26Q70HW3 274 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 DPPA2Q7Z7J5 298 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 ZNF100Q8IYN0 542 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 SELENOHQ8IZQ5 122 aaKnown RBP9.82□□□□□ -0.84
SRP54-213ENST00000556994 GAPTQ8N292 157 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 HS3ST3B1Q9Y662 390 aa9.82□□□□□ -0.84
SRP54-213ENST00000556994 IGKV1D-13A0A0B4J2D9 117 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 PITX3O75364 302 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 IGKV1-13P0DP09 117 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 SRFP11831 508 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 FUT3P21217 361 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 CDX1P47902 265 aaPredicted RBP9.81□□□□□ -0.84
SRP54-213ENST00000556994 DSCR4P56555 118 aaPredicted RBP9.81□□□□□ -0.84
SRP54-213ENST00000556994 YRDCQ86U90 279 aaKnown RBP9.81□□□□□ -0.84
SRP54-213ENST00000556994 ZNF611Q8N823 705 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 CCDC74BQ96LY2 380 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 LYRM2Q9NU23 88 aaPredicted RBP9.81□□□□□ -0.84
SRP54-213ENST00000556994 H3BP45 60 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 CYB5BO43169 146 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 HSPA12AO43301 675 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 CHST1O43916 411 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 SCAF4O95104 1147 aaKnown RBP9.81□□□□□ -0.84
SRP54-213ENST00000556994 CDS2O95674 445 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 LY86O95711 162 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 IGHV3-9P01782 118 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 TRGC2P03986 189 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms