RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 CD3GP09693 182 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 SPNP16150 400 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 SPI1P17947 270 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 OGNP20774 298 aaKnown RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 RPS3P23396 243 aaKnown RBP eCLIP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 PFN2P35080 140 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 CFHR2P36980 270 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 CSKP41240 450 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 EIF1P41567 113 aaKnown RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 MAGEA2P43356 314 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 RPS10P46783 165 aaKnown RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 FABP6P51161 128 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF136P52737 540 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 RAB2AP61019 212 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 AP1S1P61966 158 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 RRAS2P62070 204 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 IL5RAQ01344 420 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 PIGHQ14442 188 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF266Q14584 549 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 KIR2DS1Q14954 304 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 LRRC26Q2I0M4 334 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 C5orf64Q2M2E5 130 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 C2orf83Q53S99 150 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 TFDP3Q5H9I0 405 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 COQ5Q5HYK3 327 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 PABPC1L2AQ5JQF8 200 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 N4BP2L1Q5TBK1 243 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 TMEM236Q5W0B7 351 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 TRIQKQ629K1 86 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF470Q6ECI4 717 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 LCN8Q6JVE9 175 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 RPL13AP3Q6NVV1 102 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 RTL4Q6ZR62 310 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 CDKL3Q8IVW4 592 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 PDZD9Q8IXQ8 264 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 MKXQ8IYA7 352 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 NPWQ8N729 165 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 ARIH2OSQ8N7S6 290 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 COX18Q8N8Q8 333 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 GATSQ8NAP1 163 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 OR11H7Q8NGC8 314 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 OR4A15Q8NGL6 344 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 OR6K6Q8NGW6 343 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 ABHD3Q8WU67 409 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 RNF138Q8WVD3 245 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 AP3S1Q92572 193 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 MRGPRFQ96AM1 343 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 WFIKKN1Q96NZ8 548 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 COL21A1Q96P44 957 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 SCGB3A2Q96PL1 93 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 COPS4Q9BT78 406 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 SLIRPQ9GZT3 109 aaKnown RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 EDA2RQ9HAV5 297 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 NIT2Q9NQR4 276 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 OPTCQ9UBM4 332 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 SCP2D1Q9UJQ7 156 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 SAMHD1Q9Y3Z3 626 aaKnown RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 ATRNO75882 1429 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 MAP2P11137 1827 aaKnown RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 LAMA4Q16363 1823 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 MYH4Q9Y623 1939 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 FAM208AQ9UK61 1670 aaKnown RBP2.9□□□□□ -1.95
PRPF39-210ENST00000556718 CAMTA1Q9Y6Y1 1673 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 A0A0X1KG70 313 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 LOC100130705A0A1B0GUX0 176 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 FABP12A6NFH5 140 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 TMEM210A6NLX4 147 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 C1orf196B1AJZ1 125 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 LINC00587B1AMM8 73 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 D6RAR5 112 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 M0R233 179 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 PDCD5O14737 125 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 ZMPSTE24O75844 475 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 SCO1O75880 301 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 SERPINA1P01009 418 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 GLAP06280 429 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 IGKV5-2P06315 115 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 KLK1P06870 262 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 FBP1P09467 338 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 TACSTD2P09758 323 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 TSPAN19P0C672 248 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 OR8U9P0C7N5 309 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 PVALBP20472 110 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-210ENST00000556718 CCNOP22674 350 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 PAX6P26367 422 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 MARCKSL1P49006 195 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 TGM4P49221 684 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 ACOT2P49753 483 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 CRISP3P54108 245 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 TAS2R60P59551 318 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 RPS23P62266 143 aaKnown RBP2.9□□□□□ -1.95
PRPF39-210ENST00000556718 LSM3P62310 102 aaKnown RBP2.9□□□□□ -1.95
PRPF39-210ENST00000556718 TFAMQ00059 246 aaKnown RBP2.9□□□□□ -1.95
PRPF39-210ENST00000556718 GTF2BQ00403 316 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 EMX1Q04741 257 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-210ENST00000556718 DGCR6Q14129 220 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 IRF4Q15306 451 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 IMPG1Q17R60 797 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 FAM83EQ2M2I3 478 aa2.9□□□□□ -1.95
PRPF39-210ENST00000556718 ORMDL2Q53FV1 153 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms