RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 FUNDC1Q8IVP5 155 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 ITPRIPQ8IWB1 547 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 STK40Q8N2I9 435 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 ACBD4Q8NC06 268 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 OR2Z1Q8NG97 314 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 DDI1Q8WTU0 396 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 MRAP2Q96G30 205 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 DERL3Q96Q80 235 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 OR2A7Q96R45 310 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 PITX2Q99697 317 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 TAPBPLQ9BX59 468 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 SUCNR1Q9BXA5 334 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 HDHD2Q9H0R4 259 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 ZSCAN16Q9H4T2 348 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-221ENST00000556534 RDH14Q9HBH5 336 aa2.11□□□□□ -2.07
SCFD1-221ENST00000556534 YLPM1P49750 1951 aaKnown RBP2.1□□□□□ -2.07
SCFD1-221ENST00000556534 IGKV3D-11A0A0A0MRZ8 115 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 C1orf232A0A0U1RR37 186 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 A8MWL6 223 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 PRAMEF26H0Y7S4 382 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 H3BP45 60 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 UPK2O00526 184 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 FGF16O43320 207 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 COCHO43405 550 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 CA2P00918 260 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 NTF3P20783 257 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 CD34P28906 385 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 HBG1P69891 147 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 HBG2P69892 147 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 MEF2BQ02080 365 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-221ENST00000556534 IL15RAQ13261 267 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 SSX1Q16384 188 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 KLHL12Q53G59 568 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 ZNF678Q5SXM1 525 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 LAMTOR1Q6IAA8 161 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 GLYATQ6IB77 296 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 SPINT4Q6UDR6 99 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 FAM183BPQ6ZVS7 135 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 GALNT10Q86SR1 603 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 SLC26A10Q8NG04 563 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 OR5AK3PQ8NH89 298 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 FXYD5Q96DB9 178 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 TMEM56Q96MV1 263 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 GPR82Q96P67 336 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 ZNF436Q9C0F3 470 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-221ENST00000556534 DHX35Q9H5Z1 703 aaKnown RBP2.1□□□□□ -2.07
SCFD1-221ENST00000556534 LINC00574Q9H8X3 128 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 RHOFQ9HBH0 211 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 DHCR7Q9UBM7 475 aaKnown RBP2.1□□□□□ -2.07
SCFD1-221ENST00000556534 ZNF706Q9Y5V0 76 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-221ENST00000556534 NRCAMQ92823 1304 aa2.1□□□□□ -2.07
SCFD1-221ENST00000556534 CHD2O14647 1828 aaKnown RBP2.1□□□□□ -2.07
SCFD1-221ENST00000556534 RIMBP3CA6NJZ7 1639 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 RIMBP3BA6NNM3 1639 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 DNMT1P26358 1616 aaKnown RBP2.09□□□□□ -2.07
SCFD1-221ENST00000556534 RIMBP3Q9UFD9 1639 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 NOS1P29475 1434 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 SEC16AO15027 2179 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 ERCC6Q03468 1493 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 NUP205Q92621 2012 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 PGPA6NDG6 321 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 BTNL10A8MVZ5 291 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 C9J4A7 227 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 C8orf87E5RJ46 101 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 SYNGR1O43759 233 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 PDCD6O75340 191 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 RAB36O95755 333 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 LHBP01229 141 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 OCMP0CE72 109 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-221ENST00000556534 STC1P52823 247 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 EMP2P54851 167 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 CCL23P55773 120 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 RHOAP61586 193 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 BNIP2Q12982 314 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 ELOCQ15369 112 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 EXOC3L4Q17RC7 722 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 ATP6AP1LQ52LC2 224 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 PLEKHG7Q6ZR37 379 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 LINC00596Q86U02 117 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 APCDD1LQ8NCL9 501 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 MNS1Q8NEH6 495 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 OR52N1Q8NH53 320 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 DDIT4LQ96D03 193 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 ARL5BQ96KC2 179 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 LINC01587Q99440 93 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 APOL4Q9BPW4 351 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 SLC19A3Q9BZV2 496 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 SLC25A31Q9H0C2 315 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 FBXL15Q9H469 300 aa2.09□□□□□ -2.07
SCFD1-221ENST00000556534 V9GYY5 206 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-221ENST00000556534 NID2Q14112 1375 aa2.09□□□□□ -2.08
SCFD1-221ENST00000556534 RAB3GAP2Q9H2M9 1393 aa2.09□□□□□ -2.08
SCFD1-221ENST00000556534 THADAQ6YHU6 1953 aa2.09□□□□□ -2.08
SCFD1-221ENST00000556534 TRAV8-3A0A0A6YYJ7 113 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 A0A1W2PRG6 482 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 ZNF98A6NK75 572 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 GPR171O14626 319 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 CYTH3O43739 400 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 COX7A2P2O60397 106 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 OR7C2O60412 319 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms