RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 BCL2L15Q5TBC7 163 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 AADACL4Q5VUY2 407 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 NXNL2Q5VZ03 156 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 ZNF782Q6ZMW2 699 aaPredicted RBP8□□□□□ -1.13
SCFD1-220ENST00000556486 TCF23Q7RTU1 214 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 CCDC54Q8NEL0 328 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 OR4M1Q8NGD0 313 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 C10orf35Q96D05 121 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 GHITMQ9H3K2 345 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 ADGRL4Q9HBW9 690 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 PAPOLBQ9NRJ5 636 aaKnown RBP8□□□□□ -1.13
SCFD1-220ENST00000556486 INPP5EQ9NRR6 644 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 CLN6Q9NWW5 311 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 TVP23BQ9NYZ1 205 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 OR52A1Q9UKL2 312 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 IKZF2Q9UKS7 526 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 SLC22A13Q9Y226 551 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 SNX5Q9Y5X3 404 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 STAB2Q8WWQ8 2551 aa8□□□□□ -1.13
SCFD1-220ENST00000556486 FAM90A20PA6NIJ5 464 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 PRKYO43930 277 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 FAM107AO95990 144 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 ALDOBP05062 364 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 ARG1P05089 322 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 MRPL3P09001 348 aaKnown RBP7.99□□□□□ -1.13
SCFD1-220ENST00000556486 VDAC2P45880 294 aaPredicted RBP7.99□□□□□ -1.13
SCFD1-220ENST00000556486 CXCR4P61073 352 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 BLCAPP62952 87 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 CBX1P83916 185 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 SSX2Q16385 188 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 TCTEX1D4Q5JR98 221 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 CASC10Q5T4H9 136 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 C10orf99Q6UWK7 81 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 ZBTB49Q6ZSB9 765 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 ASRGL1Q7L266 308 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 MEPCEQ7L2J0 689 aaKnown RBP7.99□□□□□ -1.13
SCFD1-220ENST00000556486 C16orf82Q7Z2V1 217 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 Q8IYB0 196 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 OR5AU1Q8NGC0 362 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 CEP19Q96LK0 163 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 ZNF714Q96N38 554 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 APOL4Q9BPW4 351 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 CHST5Q9GZS9 411 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 ABCB10Q9NRK6 738 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 GPR173Q9NS66 373 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 MTCH1Q9NZJ7 389 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 MRM2Q9UI43 246 aaKnown RBP7.99□□□□□ -1.13
SCFD1-220ENST00000556486 LINC00312Q9Y6C7 94 aa7.99□□□□□ -1.13
SCFD1-220ENST00000556486 TCRBV4S1A1TA0A5B7 111 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 hADV38S2A0JD32 116 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 C9orf118A6NHY6 69 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 F8VVB4 439 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 F8VWA3 439 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 C3orf84H3BNL1 204 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 PAX4O43316 350 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 FKBP6O75344 327 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 PIPP12273 146 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-220ENST00000556486 ERP29P30040 261 aaKnown RBP7.98□□□□□ -1.13
SCFD1-220ENST00000556486 DAPP51397 102 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 FUT6P51993 359 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 OR12D2P58182 307 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 EGFEM1PQ0D2K5 195 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 FHL3Q13643 280 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 ZNF146Q15072 292 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 UBE2V2Q15819 145 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 SLX4IPQ5VYV7 408 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 C12orf73Q69YU5 71 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 GDPD3Q7L5L3 318 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 ANGPTL5Q86XS5 388 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 SLC35F2Q8IXU6 374 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 ASCC1Q8N9N2 400 aaKnown RBP7.98□□□□□ -1.13
SCFD1-220ENST00000556486 CCDC197Q8NCU1 140 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 DNAAF1Q8NEP3 725 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 THTPAQ9BU02 230 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 OR14J1Q9UGF5 321 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 HSF4Q9ULV5 492 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 SLC7A11Q9UPY5 501 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 SESN1Q9Y6P5 492 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 CSMD3Q7Z407 3707 aa7.98□□□□□ -1.13
SCFD1-220ENST00000556486 IGKV1-27A0A075B6S5 117 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 IGHV2-26A0A0B4J1V2 119 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 MEX3AA1L020 520 aaKnown RBP7.97□□□□□ -1.13
SCFD1-220ENST00000556486 ZAR1LA6NP61 321 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 ZNF670-ZNF695F2Z2N8 137 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 GATBO75879 557 aaKnown RBP7.97□□□□□ -1.13
SCFD1-220ENST00000556486 SULT1C4O75897 302 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 GCSHP23434 173 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 EDDM3BP56851 147 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 ISL1P61371 349 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 ACTA2P62736 377 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 ACTG2P63267 376 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 ACTC1P68032 377 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 ACTA1P68133 377 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 IL18R1Q13478 541 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 FLOT2Q14254 428 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 SPIN3Q5JUX0 258 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 DGAT2L7PQ6IED9 249 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 CATSPERDQ86XM0 798 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 GID4Q8IVV7 300 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 ENTHD1Q8IYW4 607 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms