RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 GSTK1Q9Y2Q3 226 aa10.89□□□□□ -0.67
ACTN1-219ENST00000556432 R4GMQ9 66 aa10.89□□□□□ -0.67
ACTN1-219ENST00000556432 A0A1B0GTI1 187 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 A0A1W2PPI3 338 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 SAP30O75446 220 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 OR2H2O95918 312 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 OR8U8P0C7N1 319 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 VDAC1P21796 283 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 SLC2A5P22732 501 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 GNGT1P63211 74 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 SCN1BQ07699 218 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 FHL3Q13643 280 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 UBE2V2Q15819 145 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 KRBOX4Q5JUW0 171 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 SPIN3Q5JUX0 258 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 OR2T5Q6IEZ7 315 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 CD300LDQ6UXZ3 194 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 ZNF429Q86V71 674 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 OR2T29Q8NH02 315 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 CORO2AQ92828 525 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 FEVQ99581 238 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 TEX12Q9BXU0 123 aa10.88□□□□□ -0.67
ACTN1-219ENST00000556432 SEBOXQ9HB31 216 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-219ENST00000556432 STARD9Q9P2P6 4700 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 A0A087X0M5 115 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 A0A1B0GX30 115 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 ZNF729A6NN14 1252 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-219ENST00000556432 MAGEB4O15481 346 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-219ENST00000556432 SYT7O43581 403 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 RPP14O95059 124 aaKnown RBP10.87□□□□□ -0.67
ACTN1-219ENST00000556432 SERPINA3P01011 423 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 ZNF44P15621 663 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 SPNP16150 400 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 GLP1RP43220 463 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 MAGEA2P43356 314 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 GNG10P50151 68 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 RAB7AP51149 207 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 ACTR3P61158 418 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 GABPB1Q06547 395 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-219ENST00000556432 DIAPH2-AS1Q14236 149 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 ZNF146Q15072 292 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 SRSF7Q16629 238 aaKnown RBP eCLIP10.87□□□□□ -0.67
ACTN1-219ENST00000556432 LTC4SQ16873 150 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 ZNF322Q6U7Q0 402 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-219ENST00000556432 MOB3BQ86TA1 216 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 OR8H3Q8N146 312 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 OR10X1Q8NGY0 326 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 GIPC3Q8TF64 312 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 CNN2Q99439 309 aaKnown RBP10.87□□□□□ -0.67
ACTN1-219ENST00000556432 SNX5Q9Y5X3 404 aa10.87□□□□□ -0.67
ACTN1-219ENST00000556432 IGHV3-72A0A0B4J1Y9 119 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 TRIM64CA6NLI5 447 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 J3QR06 171 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 LDLRAD4O15165 306 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 SRSF10O75494 262 aaKnown RBP10.86□□□□□ -0.67
ACTN1-219ENST00000556432 GP9P14770 177 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 RBP2P50120 134 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 ATP1B3P54709 279 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 CXCR4P61073 352 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 ZNF616Q08AN1 781 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 ATXN7L3Q14CW9 347 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-219ENST00000556432 TGIF2LXQ8IUE1 241 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 RNF152Q8N8N0 203 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 OR1N2Q8NGR9 330 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 HAVCR2Q8TDQ0 301 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 KIRREL1Q96J84 757 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 OR5B12Q96R08 314 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 ELAC2Q9BQ52 826 aaKnown RBP10.86□□□□□ -0.67
ACTN1-219ENST00000556432 TM2D3Q9BRN9 247 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 ADI1Q9BV57 179 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 CHST5Q9GZS9 411 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 ABCG5Q9H222 651 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 EDA2RQ9HAV5 297 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 KRT84Q9NSB2 600 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 LIN7CQ9NUP9 197 aaKnown RBP10.86□□□□□ -0.67
ACTN1-219ENST00000556432 OR6C3Q9NZP0 311 aa10.86□□□□□ -0.67
ACTN1-219ENST00000556432 CSMD3Q7Z407 3707 aa10.85□□□□□ -0.67
ACTN1-219ENST00000556432 KBTBD11-OT1A0A1B0GTJ5 212 aa10.85□□□□□ -0.67
ACTN1-219ENST00000556432 IGHG4P01861 327 aa10.85□□□□□ -0.67
ACTN1-219ENST00000556432 ATP6V1B2P21281 511 aa10.85□□□□□ -0.67
ACTN1-219ENST00000556432 PRDX6P30041 224 aa10.85□□□□□ -0.67
ACTN1-219ENST00000556432 MTCP1P56278 107 aa10.85□□□□□ -0.67
ACTN1-219ENST00000556432 C17orf58Q2M2W7 97 aa10.85□□□□□ -0.67
ACTN1-219ENST00000556432 TMEM65Q6PI78 240 aa10.85□□□□□ -0.67
ACTN1-219ENST00000556432 PGAM4Q8N0Y7 254 aa10.85□□□□□ -0.67
ACTN1-219ENST00000556432 RASL11BQ9BPW5 248 aa10.85□□□□□ -0.67
ACTN1-219ENST00000556432 ZNF556Q9HAH1 456 aa10.85□□□□□ -0.67
ACTN1-219ENST00000556432 HMG20AQ9NP66 347 aa10.85□□□□□ -0.67
ACTN1-219ENST00000556432 CCDC182A6NF36 153 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 HSPB6O14558 160 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 OVOL1O14753 267 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 HSD17B6O14756 317 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 MPZL2O60487 215 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 OCM2P0CE71 109 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 OCMP0CE72 109 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-219ENST00000556432 CCL1P22362 96 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 REG1BP48304 166 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 VEGFCP49767 419 aa10.84□□□□□ -0.67
ACTN1-219ENST00000556432 FAM98BQ52LJ0 330 aaKnown RBP10.84□□□□□ -0.67
ACTN1-219ENST00000556432 TMEM236Q5W0B7 351 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms