RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 DCUN1D5Q9BTE7 237 aa11.64□□□□□ -0.55
VIPAS39-208ENST00000556412 TM2D1Q9BX74 207 aa11.64□□□□□ -0.55
VIPAS39-208ENST00000556412 SHARPINQ9H0F6 387 aa11.64□□□□□ -0.55
VIPAS39-208ENST00000556412 SEBOXQ9HB31 216 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-208ENST00000556412 SPACA1Q9HBV2 294 aa11.64□□□□□ -0.55
VIPAS39-208ENST00000556412 HIF1ANQ9NWT6 349 aa11.64□□□□□ -0.55
VIPAS39-208ENST00000556412 ABRACLQ9P1F3 81 aa11.64□□□□□ -0.55
VIPAS39-208ENST00000556412 COMMD3Q9UBI1 195 aa11.64□□□□□ -0.55
VIPAS39-208ENST00000556412 FBLN5Q9UBX5 448 aa11.64□□□□□ -0.55
VIPAS39-208ENST00000556412 A0A0A6YYD4 124 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 A0A1W2PQ09 198 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 A8MXK9 166 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 C22orf46C9J442 243 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 MCRIP1C9JLW8 97 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 MGST3O14880 152 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 SOCS1O15524 211 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 LMO1P25800 156 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 AESQ08117 197 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 GLCCI1Q86VQ1 547 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 MRI1Q9BV20 369 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 MMP26Q9NRE1 261 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 ETV7Q9Y603 341 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 MYO9AB2RTY4 2548 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 UBE2QL1A1L167 161 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 METTL21EPA6NDL7 271 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A10PA6NDY2 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A18PA6NE21 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A16PA6NEW6 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A20PA6NIJ5 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A8PA6NJQ4 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A7PA6NKC0 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A22PA8MWA6 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A12PA8MX19 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A5PA8MXJ8 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A23PA8MXZ1 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 GPR37O15354 613 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 PDCD6O75340 191 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A15PP0C7V4 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A13PP0C7W8 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A14PP0C7W9 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM90A24PP0C7X0 464 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 ZNF182P17025 639 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 RAB6AP20340 208 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 FUT3P21217 361 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 SIGIRRQ6IA17 410 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 SAMD12Q8N8I0 201 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 OR56B1Q8NGI3 324 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 AP3S1Q92572 193 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 TMEM186Q96B77 213 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 C1orf159Q96HA4 380 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 CYYR1Q96J86 154 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 DCTN5Q9BTE1 182 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 IFT22Q9H7X7 185 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 C19orf12Q9NSK7 152 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 RHBDL2Q9NX52 303 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 NDUFA13Q9P0J0 144 aa11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 RPUSD1Q9UJJ7 312 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-208ENST00000556412 AKAP9Q99996 3911 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 VPS13CQ709C8 3753 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 A0A075B6Q4 140 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 TMEM127O75204 238 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 ECDO95905 644 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 RPL31P62899 125 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 FAM189A2Q15884 450 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 MOGAT2Q3SYC2 334 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 KRBOX4Q5JUW0 171 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 DCAF12L2Q5VW00 463 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 FAHD2BQ6P2I3 314 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 BTNL3Q6UXE8 466 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 C6orf201Q7Z4U5 140 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 RTN4RL2Q86UN3 420 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 DYNC2LI1Q8TCX1 351 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 RAB40AQ8WXH6 277 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 DYRK2Q92630 601 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 PTX4Q96A99 478 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 PHF21AQ96BD5 680 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 KCTD12Q96CX2 325 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 FAHD2AQ96GK7 314 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 NUDT16L1Q9BRJ7 211 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 PLEKHJ1Q9NW61 149 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 SPATA2Q9UM82 520 aa11.62□□□□□ -0.55
VIPAS39-208ENST00000556412 TRAV20A0A0B4J274 112 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 PPIAL4CA0A0B4J2A2 164 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 IGHV2-70DA0A0C4DH43 119 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 H3BUI4 141 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 ENSAO43768 121 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 PPIAL4GP0DN37 164 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 FOSL1P15407 271 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 CHATP28329 748 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 GLIPR1P48060 266 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 P2RX3P56373 397 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 SCAND1P57086 179 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 RBM39Q14498 530 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 TRAPPC6BQ86SZ2 158 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 BIVMQ86UB2 503 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 PLPPR1Q8TBJ4 325 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 DGCR14Q96DF8 476 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 SLC25A38Q96DW6 304 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 FAAP24Q9BTP7 215 aa11.61□□□□□ -0.55
VIPAS39-208ENST00000556412 YAE1D1Q9NRH1 226 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms