RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 ZNF691Q5VV52 312 aa10.18□□□□□ -0.78
SNX6-207ENST00000556303 Q6P435 159 aa10.18□□□□□ -0.78
SNX6-207ENST00000556303 C16orf82Q7Z2V1 217 aa10.18□□□□□ -0.78
SNX6-207ENST00000556303 TRAPPC6BQ86SZ2 158 aa10.18□□□□□ -0.78
SNX6-207ENST00000556303 SETD9Q8NE22 299 aa10.18□□□□□ -0.78
SNX6-207ENST00000556303 OR51T1Q8NGJ9 327 aa10.18□□□□□ -0.78
SNX6-207ENST00000556303 TSEN15Q8WW01 171 aaKnown RBP10.18□□□□□ -0.78
SNX6-207ENST00000556303 CFHR4Q92496 578 aa10.18□□□□□ -0.78
SNX6-207ENST00000556303 RFT1Q96AA3 541 aa10.18□□□□□ -0.78
SNX6-207ENST00000556303 SPACA5Q96QH8 159 aa10.18□□□□□ -0.78
SNX6-207ENST00000556303 OR6C3Q9NZP0 311 aa10.18□□□□□ -0.78
SNX6-207ENST00000556303 HSPE1-MOB4S4R3N1 261 aa10.18□□□□□ -0.78
SNX6-207ENST00000556303 NOTCH3Q9UM47 2321 aa10.18□□□□□ -0.78
SNX6-207ENST00000556303 ODAMA1E959 279 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 FAM90A22PA8MWA6 464 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 E9PI62 339 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 SIRPB1O00241 398 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 SLC33A1O00400 549 aaPredicted RBP10.17□□□□□ -0.78
SNX6-207ENST00000556303 DEGS1O15121 323 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 BDH1Q02338 343 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 CDK5R1Q15078 307 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 ASCL4Q6XD76 172 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 DYNAPQ8N1N2 210 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 ABHD12Q8N2K0 398 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 TPRX1Q8N7U7 411 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 ZNF565Q8N9K5 539 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 OR4D6Q8NGJ1 314 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 OR5D18Q8NGL1 313 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 PCDHB16Q9NRJ7 776 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 BABAM2Q9NXR7 383 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 DPM3Q9P2X0 92 aa10.17□□□□□ -0.78
SNX6-207ENST00000556303 DIMT1Q9UNQ2 313 aaKnown RBP10.17□□□□□ -0.78
SNX6-207ENST00000556303 EXOSC1Q9Y3B2 195 aaKnown RBP10.17□□□□□ -0.78
SNX6-207ENST00000556303 TET2Q6N021 2002 aaPredicted RBP10.16□□□□□ -0.78
SNX6-207ENST00000556303 A0A087X0M5 115 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 A0A1B0GX30 115 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 ZNF729A6NN14 1252 aaPredicted RBP10.16□□□□□ -0.78
SNX6-207ENST00000556303 OGG1O15527 345 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 CSF1P09603 554 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 MYL12AP19105 171 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 PTGFRP43088 359 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 SNU13P55769 128 aaKnown RBP10.16□□□□□ -0.78
SNX6-207ENST00000556303 AESQ08117 197 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 NHLRC3Q5JS37 347 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 KRBOX4Q5JUW0 171 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 LDLRAD2Q5SZI1 272 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 OR4P4Q8NGL7 312 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 NDNFQ8TB73 568 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 SMIM19Q96E16 107 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 AKR1E2Q96JD6 320 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 GPER1Q99527 375 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 BARHL1Q9BZE3 327 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 PRSS22Q9GZN4 317 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 LINC00574Q9H8X3 128 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 TMEM138Q9NPI0 162 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 PAK1IP1Q9NWT1 392 aaPredicted RBP10.16□□□□□ -0.78
SNX6-207ENST00000556303 CHCHD3Q9NX63 227 aaKnown RBP10.16□□□□□ -0.78
SNX6-207ENST00000556303 IL36GQ9NZH8 169 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 ZNF281Q9Y2X9 895 aa10.16□□□□□ -0.78
SNX6-207ENST00000556303 KBTBD11-OT1A0A1B0GTJ5 212 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 MEGF11A6BM72 1044 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 LEUTXA8MZ59 168 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 OOSP1A8MZH6 123 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 F2RL2O00254 374 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 CHST1O43916 411 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 ZNF780AO75290 641 aaPredicted RBP10.15□□□□□ -0.78
SNX6-207ENST00000556303 GPX5O75715 221 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 IGLV1-47P01700 117 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 CALCBP10092 127 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 CDK2P24941 298 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 PAX6P26367 422 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 C21orf33P30042 268 aaPredicted RBP10.15□□□□□ -0.78
SNX6-207ENST00000556303 BRS3P32247 399 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 CEACAM3P40198 252 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 GLIPR1P48060 266 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 ETV1P50549 477 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 GTF2A1P52655 376 aaPredicted RBP10.15□□□□□ -0.78
SNX6-207ENST00000556303 PRRX1P54821 245 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 DEFA6Q01524 100 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 SLC34A1Q06495 639 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 SMN1Q16637 294 aaKnown RBP10.15□□□□□ -0.78
SNX6-207ENST00000556303 CCDC144NLQ6NUI1 221 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 CCBE1Q6UXH8 406 aaPredicted RBP10.15□□□□□ -0.78
SNX6-207ENST00000556303 SLC16A12Q6ZSM3 486 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 RNF144BQ7Z419 303 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 LINC00596Q86U02 117 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 DHRSXQ8N5I4 330 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 KLHDC1Q8N7A1 406 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 OR10A7Q8NGE5 316 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 OR52N1Q8NH53 320 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 TMEM106AQ96A25 262 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 TMEM80Q96HE8 168 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 IFT22Q9H7X7 185 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 ZNF702PQ9H963 129 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.15□□□□□ -0.78
SNX6-207ENST00000556303 HILPDAQ9Y5L2 63 aa10.15□□□□□ -0.78
SNX6-207ENST00000556303 MEX3AA1L020 520 aaKnown RBP10.14□□□□□ -0.79
SNX6-207ENST00000556303 H0YJX3 145 aa10.14□□□□□ -0.79
SNX6-207ENST00000556303 TOR1AO14656 332 aa10.14□□□□□ -0.79
SNX6-207ENST00000556303 KCNAB3O43448 404 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms