RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 IGHV2-70P01814 119 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 CSN2P05814 226 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 LYNX1P0DP58 116 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 SLC25A16P16260 332 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 GNB3P16520 340 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 COL8A2P25067 703 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 NPY4RP50391 375 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 ATXN7L3Q14CW9 347 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-220ENST00000555634 ZMYND11Q15326 602 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 CDNFQ49AH0 187 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 ESCO2Q56NI9 601 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 AVPI1Q5T686 147 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 HACD4Q5VWC8 232 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 SHEQ5VZ18 495 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 TRAT1Q6PIZ9 186 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 C6orf201Q7Z4U5 140 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 CCDC190Q86UF4 302 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 OR8H2Q8N162 312 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 GDPD1Q8N9F7 314 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 C19orf18Q8NEA5 215 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 OR5T2Q8NGG2 359 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 ANGPTL6Q8NI99 470 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 SETD6Q8TBK2 473 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 IGFBPL1Q8WX77 278 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 NEIL1Q96FI4 390 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-220ENST00000555634 SDSLQ96GA7 329 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 SNX22Q96L94 193 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 LURAP1Q96LR2 239 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 CCDC32Q9BV29 185 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 PECRQ9BY49 303 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 PPA2Q9H2U2 334 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.38□□□□□ -0.91
SHMT2-220ENST00000555634 TAS2R8Q9NYW2 309 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 RCC2Q9P258 522 aaKnown RBP9.38□□□□□ -0.91
SHMT2-220ENST00000555634 SLC25A10Q9UBX3 287 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-220ENST00000555634 DCHS2Q6V1P9 2916 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 DSCAML1Q8TD84 2053 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 IGKV1D-17A0A075B6S4 117 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 A0A0G2JMP0 313 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 A0A0X1KG70 313 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 UBE2QL1A1L167 161 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 POM121CA8CG34 1229 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 GABARAPH6UMI1 98 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 MFNGO00587 321 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 CTDSPLO15194 276 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 SIGLEC5O15389 551 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 GSTT2BP0CG30 244 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 NDUFB7P17568 137 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 GIFP27352 417 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 CD40LGP29965 261 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 RCVRNP35243 200 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 FAUP35544 74 aaKnown RBP9.37□□□□□ -0.91
SHMT2-220ENST00000555634 CEBPDP49716 269 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-220ENST00000555634 EDDM3BP56851 147 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 SSBP1Q04837 148 aaKnown RBP9.37□□□□□ -0.91
SHMT2-220ENST00000555634 LSAMPQ13449 338 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 EDDM3AQ14507 147 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 CLEC12BQ2HXU8 276 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 FAM201AQ5SY85 155 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 C6orf183Q5T699 404 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 TRAPPC6BQ86SZ2 158 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 Q8N402 240 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 OR4M2Q8NGB6 313 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 NRGNQ92686 78 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 TMEM246Q9BRR3 403 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 CHST6Q9GZX3 395 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 LIME1Q9H400 295 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 AUNIPQ9H7T9 357 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 AKIP1Q9NQ31 210 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 KCNIP1Q9NZI2 227 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 CLN8Q9UBY8 286 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 TRAPPC2LQ9UL33 140 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 CRYBG3Q68DQ2 2970 aa9.37□□□□□ -0.91
SHMT2-220ENST00000555634 DOCK11Q5JSL3 2073 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 CENPEQ02224 2701 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 TRGV10A0A0A0MS01 117 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 A0A0A6YYD4 124 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 KIR2DS1A0A191URI9 304 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 CEACAM18A8MTB9 384 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 NDUFS7O75251 213 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 RBBP9O75884 186 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 ECDO95905 644 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-220ENST00000555634 TK1P04183 234 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 CSF1P09603 554 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 DTYMKP23919 212 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 LMO1P25800 156 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 KIR2DS4P43632 304 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 ARPC4P59998 168 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 GNB2P62879 340 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 PLA2G7Q13093 441 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 MADCAM1Q13477 382 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 KIR2DS1Q14954 304 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 PDCD1Q15116 288 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 MOGAT2Q3SYC2 334 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 ZNF260Q3ZCT1 412 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 ACTBL2Q562R1 376 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 KRBOX4Q5JUW0 171 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 Q5PR19 223 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 ATPAF1Q5TC12 328 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-220ENST00000555634 CD276Q5ZPR3 534 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms