RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 PLEKHJ1Q9NW61 149 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 TBL2Q9Y4P3 447 aaKnown RBP3.04□□□□□ -1.92
VRK1-205ENST00000555402 POLR3HQ9Y535 204 aaPredicted RBP3.04□□□□□ -1.92
VRK1-205ENST00000555402 ADAMTSL3P82987 1691 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 KIF26AQ9ULI4 1882 aaPredicted RBP3.03□□□□□ -1.92
VRK1-205ENST00000555402 IGKV1-6A0A0C4DH72 117 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 ZNF98A6NK75 572 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 OR2A4O95047 310 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 LHBP01229 141 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 CDK1P06493 297 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 ZNF14P17017 642 aaPredicted RBP3.03□□□□□ -1.92
VRK1-205ENST00000555402 ZNF7P17097 686 aaPredicted RBP3.03□□□□□ -1.92
VRK1-205ENST00000555402 TAC1P20366 129 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 MPV17P39210 176 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 SLC18A1P54219 525 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 DNLZQ5SXM8 178 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 MORN3Q6PF18 240 aaPredicted RBP3.03□□□□□ -1.92
VRK1-205ENST00000555402 TTC33Q6PID6 262 aaPredicted RBP3.03□□□□□ -1.92
VRK1-205ENST00000555402 Q6ZT83 130 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 FAM231DQ6ZW35 169 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 FAM19A1Q7Z5A9 133 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 MRPL52Q86TS9 123 aaKnown RBP3.03□□□□□ -1.92
VRK1-205ENST00000555402 STX12Q86Y82 276 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 OR52N1Q8NH53 320 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 OR5P2Q8WZ92 322 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 QKIQ96PU8 341 aaKnown RBP eCLIP3.03□□□□□ -1.92
VRK1-205ENST00000555402 OR2A7Q96R45 310 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 DSN1Q9H410 356 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 DNAJC27Q9NZQ0 273 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 SNX24Q9Y343 169 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 INSIG2Q9Y5U4 225 aa3.03□□□□□ -1.92
VRK1-205ENST00000555402 A8MUU9 505 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 GOLGA6L19H0YKK7 550 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 J3QLI3 93 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 MFNGO00587 321 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 LYPLA2O95372 231 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 CD8AP01732 235 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 ORM1P02763 201 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 SEC11BP0C7V7 166 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 TGFBR1P36897 503 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 TGM4P49221 684 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 ACOT2P49753 483 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 GDI2P50395 445 aaKnown RBP3.02□□□□□ -1.93
VRK1-205ENST00000555402 ACTBP60709 375 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 RHOAP61586 193 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 VBP1P61758 197 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 ACTG1P63261 375 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 DR1Q01658 176 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 SLC36A2Q495M3 483 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 ATP6AP1LQ52LC2 224 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 TIMM23BQ5SRD1 257 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 CLVS2Q5SYC1 327 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 SDHAF4Q5VUM1 108 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 KCTD16Q68DU8 428 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 IGFL1Q6UW32 110 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 CASP12Q6UXS9 341 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 GAPTQ8N292 157 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 CCDC112Q8NEF3 446 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 LFNGQ8NES3 379 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 FAM57AQ8TBR7 257 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 RNF133Q8WVZ7 376 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 SPACA5Q96QH8 159 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 ZNF649Q9BS31 505 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 MS4A8Q9BY19 250 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 NXF2Q9GZY0 626 aaKnown RBP3.02□□□□□ -1.93
VRK1-205ENST00000555402 PARP11Q9NR21 331 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 IL37Q9NZH6 218 aa3.02□□□□□ -1.93
VRK1-205ENST00000555402 BAZ2AQ9UIF9 1905 aaKnown RBP3.01□□□□□ -1.93
VRK1-205ENST00000555402 A0A1B0GX12 115 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 C9J4A7 227 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 C9JQL5 133 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 FTCDNL1E5RQL4 147 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 LRRN3E7EW58 273 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 ATP8B1O43520 1251 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 CNMDO75829 334 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 ATP6V1G2O95670 118 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 RAB36O95755 333 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 IFNA6P05013 189 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 SNRPAP09012 282 aaKnown RBP3.01□□□□□ -1.93
VRK1-205ENST00000555402 OR10A3P58181 314 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 AP3S2P59780 193 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 REEP5Q00765 189 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 TRAM1Q15629 374 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 TMEM249Q2WGJ8 235 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 SP6Q3SY56 376 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 DNAL1Q4LDG9 190 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 OR10J3Q5JRS4 329 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 NIPAL1Q6NVV3 410 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 PRNTQ86SH4 94 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 C2orf73Q8N5S3 287 aaPredicted RBP3.01□□□□□ -1.93
VRK1-205ENST00000555402 TMEM251Q8N6I4 163 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 PHOSPHO2Q8TCD6 241 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 DYNC2LI1Q8TCX1 351 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 CMTM5Q96DZ9 223 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 SELENOSQ9BQE4 189 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 SCRT1Q9BWW7 348 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 OR51V1Q9H2C8 321 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 LINC00574Q9H8X3 128 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 SND1-IT1Q9HBX3 110 aa3.01□□□□□ -1.93
VRK1-205ENST00000555402 ABCB9Q9NP78 766 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms